Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3507 ATGGGTTTATGTTTTTCATCCACAAAAGTAGTTAGCGGCTCTAACGGCAATACAACGAATAATGATAACCGTAAACGGAATTCGTCGACCTCCACGGAAACTGTTACCGGGACGTCAACGAAGGCGGGGGCGGCGTCGGTACAGAAACATCTGGTGCCGAGCTCTGGTCAGCGGAGGAGAGGACCGGATGAAGGCCAGAAGAAAGGTAATCCAAGTCAGCAAACGAAGCCGAAAGATAAAGTTAGTTCGCGGCATGTTCCGTGTGGGAAGCGAACGGATTTTGGTTATGAGAAGGATTTTGATAAGAGGTTTACGCTTGGGAAGTTGCTGGGACATGGACAATTTGGTTATACTTATGTTGGAATTGATAAATCTAATGGAGATCGTGTTGCTGTTAAGAGACTAGAGAAAGCAAAGATGGTTCTCCCCATTGCTGTTGAAGATGTAAAGAGAGAGGTCAAGATATTGAAAGAACTTACAGGCCATGAAAACGTGGTTCAGTTCTATAATGCTTTTGAGGATGATTCATATGTGTACATAGTTATGGAGTTATGCGAGGGGGGAGAACTACTAGACCGGATACTGGGCAAGAAGGACAGCCGTTATACTGAAAAAGATGCTGCAGTGGTTGTAAGGCAGATGCTGAAGGTTGCAGCTCAATGTCATTTACATGGTTTAGTACATCGCGACATGAAGCCAGAGAATTTTCTTTTCAAATCAAACAGAGAAGATTCAGCTTTAAAGGCTACTGATTTTGGTTTGTCTGATTTCATAAAACCTGGAAAGAGGTTTCCAGATATTGTTGGAAGTGCTTACTACGTCGCACCAGAAGTTTTAAAACGGAAGTCTGGCCCTGAATCGGATGTATGGAGTATTGGTGTGATTACATACATATTGCTTTGTGGGAGACGGCCATTTTGGGATAAGACTGAGGATGGTATCTTCAAGGAGGTCTTACGGAATAAGCCTGATTTCCGGCGGAAACCATGGCCAACCATAAGTACTGCTGCAAAAGATTTTGTGAAGAAATTGTTGGTAAAAGATCCTCGGGCAAGATTAACTGCTGCTCAGGCTCTATCACATCCATGGGTTAGAGAAGGAGGAGAGGCATCCGAGATTCCGATTGATATATCTGTCCTAAATAACATGCGACAGTTTGTAAAGTATAGTCGATTGAAACAATTTGCATTGAGGGCATTGGCCAGCACACTTAACGAAGGTGAGTTTTCTGATCTAAAAGATCAGTTTGATGCAATAGACGTGGACAAAAATGGTGCTATTAGTCTTGAAGAGATGAGACAGGCTCTTGCTAAAGATCTCCCATGGAAGTTGAAAGAATCCCGGGTATTAGAGATATTGCAAGCGATAGACAGCAACACAGATGGACTAGTAGATTTTACCGAGTTTGTAGCAGCTACATTACATGTGCATCAATTGGAGGAACATGACTCTGATAAGTGGCAGCAACGGTCACAGGCTGCTTTTGAGAAATTTGACTTAGATAAGGATGGCTATATTACTCCAGAGGAACTGAGAATGCATACTGGTATGAGAGGCTCCATTGATCCTTTGCTTGAGGAAGCCGATATTGACAAAGATGGAAAGATCAGCTTACCAGAATTTCGGAGACTTTTAAGAACTGCAAGCATTGGTTCTCGAAATATAAATAGCCCGTCTCACCGTAACAGAAGGGCCTAG 1698 0.4299 MGLCFSSTKVVSGSNGNTTNNDNRKRNSSTSTETVTGTSTKAGAASVQKHLVPSSGQRRRGPDEGQKKGNPSQQTKPKDKVSSRHVPCGKRTDFGYEKDFDKRFTLGKLLGHGQFGYTYVGIDKSNGDRVAVKRLEKAKMVLPIAVEDVKREVKILKELTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILGKKDSRYTEKDAAVVVRQMLKVAAQCHLHGLVHRDMKPENFLFKSNREDSALKATDFGLSDFIKPGKRFPDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISTAAKDFVKKLLVKDPRARLTAAQALSHPWVREGGEASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLNEGEFSDLKDQFDAIDVDKNGAISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFTEFVAATLHVHQLEEHDSDKWQQRSQAAFEKFDLDKDGYITPEELRMHTGMRGSIDPLLEEADIDKDGKISLPEFRRLLRTASIGSRNINSPSHRNRRA* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3507 565 Gene3D - 405 474 - -
Psa2g3507 565 Gene3D - 381 544 - -
Psa2g3507 565 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 28-LIKE 24 555 - -
Psa2g3507 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Psa2g3507 565 ProSiteProfiles EF-hand calcium-binding domain profile. 486 521 IPR002048 GO:0005509
Psa2g3507 565 SUPERFAMILY Protein kinase-like (PK-like) 101 375 IPR011009 -
Psa2g3507 565 ProSiteProfiles EF-hand calcium-binding domain profile. 444 479 IPR002048 GO:0005509
Psa2g3507 565 ProSitePatterns EF-hand calcium-binding domain. 499 511 IPR018247 -
Psa2g3507 565 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Psa2g3507 565 ProSiteProfiles EF-hand calcium-binding domain profile. 524 551 IPR002048 GO:0005509
Psa2g3507 565 CDD STKc_CAMK 103 363 - -
Psa2g3507 565 SUPERFAMILY EF-hand 396 547 IPR011992 -
Psa2g3507 565 MobiDBLite consensus disorder prediction 1 88 - -
Psa2g3507 565 MobiDBLite consensus disorder prediction 1 53 - -
Psa2g3507 565 ProSiteProfiles Protein kinase domain profile. 104 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3507 565 Gene3D Phosphorylase Kinase; domain 1 97 189 - -
Psa2g3507 565 Gene3D Transferase(Phosphotransferase) domain 1 190 371 - -
Psa2g3507 565 ProSitePatterns EF-hand calcium-binding domain. 457 469 IPR018247 -
Psa2g3507 565 ProSitePatterns EF-hand calcium-binding domain. 420 432 IPR018247 -
Psa2g3507 565 ProSiteProfiles EF-hand calcium-binding domain profile. 407 442 IPR002048 GO:0005509
Psa2g3507 565 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 555 - -
Psa2g3507 565 Pfam Protein kinase domain 105 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3507 565 SMART serkin_6 104 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3507 565 ProSitePatterns EF-hand calcium-binding domain. 529 541 IPR018247 -
Psa2g3507 565 Pfam EF-hand domain pair 409 473 IPR002048 GO:0005509
Psa2g3507 565 Pfam EF-hand domain pair 492 545 IPR002048 GO:0005509
Psa2g3507 565 SMART efh_1 411 439 IPR002048 GO:0005509
Psa2g3507 565 SMART efh_1 520 548 IPR002048 GO:0005509
Psa2g3507 565 SMART efh_1 448 476 IPR002048 GO:0005509
Psa2g3507 565 SMART efh_1 490 518 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3507 Psa-Chr2 384784127 384790118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3507 1 558 EF-hand Containing Proteins AT2G17890 75.395 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Psa2g3507 Pkinase 2.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3507 K13412 - gmx:100817249 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3507 2 384784127 384790118 Psa2g3507 2 384784127 384790118 ECH