Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3505 ATGATTTCTTCTGTAGTATCTCTTCCTTCTTCTCTCTACGCCGCAAACTTCTCCGGTGTTAACACCACCGTAGGTCCATCTCCTCGCCGCGTCAGATCTCGGCCAATACTCATCACCGCTAGCGCTACTGCCACCGCTGAAGCTCGCTCTACATGGACAGAACAACCAAGAACTTCGTATCTGAACTTGAACACGATCTCTTCTCCTTCGCTCTACGAGATCCTCGGTATACAAGCAGGTGCTTCGGTACAAGAGATCAAGTCTGCGTACCGTCGACTTGCCAGAGTCTGCCACCCTGACGTGGCGGCGATTGACCGGAAAAACTCGTCGGCGGATGACTTCATGAAAATTCACGCTGCCTACTCCACGCTCTCGGATCCTGATAAACGTGCTAATTATGACCGGAGCCTTTTCCGACGACAACGGCCGTTGTCGATGATGTCCGGCTACACTAGTCGGAAATGGGAAACGGATCAGTGTTGGTAG 486 0.5206 MISSVVSLPSSLYAANFSGVNTTVGPSPRRVRSRPILITASATATAEARSTWTEQPRTSYLNLNTISSPSLYEILGIQAGASVQEIKSAYRRLARVCHPDVAAIDRKNSSADDFMKIHAAYSTLSDPDKRANYDRSLFRRQRPLSMMSGYTSRKWETDQCW* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3505 161 CDD DnaJ 72 126 IPR001623 -
Psa2g3505 161 Gene3D DnaJ domain 58 158 IPR036869 -
Psa2g3505 161 SUPERFAMILY Chaperone J-domain 65 144 IPR036869 -
Psa2g3505 161 PRINTS DnaJ domain signature 72 90 IPR001623 -
Psa2g3505 161 PRINTS DnaJ domain signature 90 105 IPR001623 -
Psa2g3505 161 PRINTS DnaJ domain signature 109 129 IPR001623 -
Psa2g3505 161 ProSitePatterns Nt-dnaJ domain signature. 114 133 IPR018253 -
Psa2g3505 161 PANTHER - 4 161 - -
Psa2g3505 161 Pfam DnaJ domain 71 134 IPR001623 -
Psa2g3505 161 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 4 161 - -
Psa2g3505 161 SMART dnaj_3 69 129 IPR001623 -
Psa2g3505 161 ProSiteProfiles dnaJ domain profile. 70 137 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3505 Psa-Chr2 384722726 384724882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3505 72 134 C2H2 Transcription Factor Family AT1G74250 44.776 1.48e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3505 - - gmx:100800959 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3505 2 384722726 384724882 Psa2g3505 2 384722726 384724882 ECH
Psa2g3505 2 384722726 384724882 Psa4g2339 4 189068415 189069429 ECH