Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3457 ATGGCTTTCATGGCTACATGCTTGAATTTAATTATCATGCTTTCAGTTGTTTCTACAGGCAAATCACTGAGCTTAAACTACTATGAAAAGACATGCCATGATCTGGAGTTTATTGTTTTGAAGGCAGTGAAGGATGCTAGTGCTAAGGACAAAACTGTTCCAGCAGCACTTCTGCGAATGCACTTCCATGATTGCTTCGTTCGAGGATGTGATGCCTCTTCTGGAGGACCTAAATGGGATGTTCCTAAAGGAAGAAAGGATGGAAGAACATCTAAGGCCAGTGAAACAAGACAATTACCAGCACCAACATTCAACATATCACAACTGCAGAAAAGCTTCTCTCAAAGAGCATTGTCAGCCGAAGACTTGGTAGCTCTGTCAGGAGGGCATACCTTAGGTTTCTCTCACTGCTCATCTTTCCGGAACAGAATCCAAAACTTCAATGCTACACATCAGGTGGACCCTTCATTAAATCCGTCGTTTGCAGCAAAACTAAAATCAACTTGTCTGTTGAAAAATAAGGCAAAAAATGCAGGCGCCACAATGGACCCTTCTTCAACAACTTTCGATAATACATATTACAAGTTGATCCTCCAACAAAAAGGCTTGTTTTCTTCTGATCAGGCTTTGCTTGACAGCCCAAACACCAAGCGCTTGGTTTCTAAGTTTGCCGCCTCACAAGAGGCTTTCTACAAAGCTTTTGCAAAGTCCATGATCAAAATGAGTAGCATCAACGGTGGGCAGGAAGTTAGAAAGGACTGCAGAAAAATCAATTAG 777 0.4196 MAFMATCLNLIIMLSVVSTGKSLSLNYYEKTCHDLEFIVLKAVKDASAKDKTVPAALLRMHFHDCFVRGCDASSGGPKWDVPKGRKDGRTSKASETRQLPAPTFNISQLQKSFSQRALSAEDLVALSGGHTLGFSHCSSFRNRIQNFNATHQVDPSLNPSFAAKLKSTCLLKNKAKNAGATMDPSSTTFDNTYYKLILQQKGLFSSDQALLDSPNTKRLVSKFAASQEAFYKAFAKSMIKMSSINGGQEVRKDCRKIN* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3457 258 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g3457 258 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g3457 258 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g3457 258 SUPERFAMILY Heme-dependent peroxidases 23 258 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa2g3457 258 PANTHER PEROXIDASE 7 73 - -
Psa2g3457 258 PANTHER PEROXIDASE 74 257 - -
Psa2g3457 258 Gene3D - 74 258 - -
Psa2g3457 258 Gene3D Peroxidase, domain 2 100 241 - -
Psa2g3457 258 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g3457 258 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g3457 258 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g3457 258 PANTHER PEROXIDASE 25-RELATED 7 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g3457 258 PANTHER PEROXIDASE 25-RELATED 74 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa2g3457 258 ProSitePatterns Peroxidases proximal heme-ligand signature. 122 132 IPR019793 -
Psa2g3457 258 ProSiteProfiles Plant heme peroxidase family profile. 22 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g3457 258 Gene3D - 23 73 - -
Psa2g3457 258 CDD secretory_peroxidase 23 257 IPR033905 GO:0004601|GO:0042744
Psa2g3457 258 Pfam Peroxidase 74 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g3457 258 Pfam Peroxidase 41 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa2g3457 258 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3457 Psa-Chr2 382489840 382491148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3457 10 257 Peroxidase AT5G42180 47.078 2.38e-88 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3457 K00430 - gmx:102665908 361.303