Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3444 ATGGCGGAAACCGGCGCTGACGGAAATGGTTTTACCTCTCTCCACGGCGACTTGGACTTGACGATAATTGCGGCTCGCCGGTTACCTAATATGGACATCGTTTCGGAGCGTTTCCGCCGCTGCGTTACCGCTTGCGACACTATTAAATACAATTCAACTTCTGATGCAGCGGATGAGATCACTCATAAGGAGCACCGACACCGGAGAAAGATCATTACGAGTGATCCTTATGTCACTGTTATGGTGCCGCAAGCTACGGTTGCACGGACGCGAGTGCTTAAGAACTCGCCGAATCCTGAGTGGAAGGAACGGTTTAACATTCCGTTAGCACATTCGGTTGCCGATTTGGAATTTCGTGTCAAAGATGATGATGTTTTTGGTTCTCAAACTATGGGAACAGTTAAGATTCCGGCACAGAGAGTTGCCACCGGCGAGACTATTTCCGGTTGGTTTCCTATTCTTGGGACCAATGGTAAACCGCCGAAACAGGACACTGCGCTTCATTTGGAAATGAAGTTCACGGCGGTGGACCAGAATCCTCTATACCTTCGCGGCATTGCGGCTGATCCCGAGCACAAAGGAGTGAGGCACACATATTTTCCGGTGAGGAAGGGAAGTTTGGTGAGGCTTTACCAAGACGCACATTGTCCCCATGGAACTGTACCGGAGATTGAGCTTGATAATGGTAACGTTTATAAACCGGAGAATTGTTGGGAAGATATATGTTATGCTATAACAGAAGCTCATCACATGGTTTATTTAGTCGGTTGGTCAATTTACCATAAAGTGAGGCTTGTTAGGGAACCTTCTAGACCTCTTCCGCGGGGTGGGGATTTAACACTTGGTGAATTACTCAAGTATAAGTCTGAAGAAGGGGTGAGAGTTTTATTGCTCGTTTGGGATGATAAAACTTCCCATGATAAGGTCTTCTTCAAGTCGACTGGAGTAATGATGACTCATGATGAGGAAACAAAGAAGTTTTTCAAACATTCTTCTGTCATGTGTGTTTTGGCGCCTCGCTATGCTAGCAGTAAGATGAGCTTCATTAAACAACAGGTTGTTGGAACTGTCTTCACACACCACCAAAAATGTGTTATTGTGGACACACAGGCTTCTGGTAATAACAGAAGGATATCCACTTTTATAGGAGGTCTTGATTTGTGTGATGGACGCTATGACACACCCGAGCATCGACTTTTTCGTGATCTCGATACTGTATTTGCCGGTGATTTCCACAATCCTACATTTCCTTCTGGAACAAGGGCTCCGAGACAACCGTGGCATGATTTGCACTGCAGAATCGATGGACCTGCTGCATATGATATTCTTATTAATTTTGAACAACGATGGAGAAAAGCAACTAAGTGGAAAGAGTTTGCATTTCTTTTTAAAAAAGCTTCTCAGTGGAATGACGATGCTTTAATAAGAGTAGAACGCATCTCATGGATATTAAGTCCTTCTCATCGTACCTCAAAGGATGATTATACAACTGTTCCAGGGGATGATCCTTTAGTATGTGTTTCGAAAGAAGATAATCCTGAAAACTGGCATGTCCAGATCTTCCGCTCCATTGATTCAGGATCCTTGAAAGGATTTCCCAAACGTGTTGATGTTGCTCTATCCCAGAATCTCATTTGTGCTAAAAGTTTGGTTATAGACAAAAGCATTCAAACAGGATACATCCAAGCTATCAGATCTGCTCAACATTTCATTTATATCGAAAACCAATACTTCATCGGATCTTCATATGCATGGCCATCTTACAAAGATGCAGGGGCTGATAATCTTATCCCAATGGAATTGGCACTGAAAATTGCTAGTAAAATCAGAGCTAATGAGAAATTTGCTATTTATATTGTTTTACCGATGTGGCCAGAAGGTGATCCTAAATCAGGAGCTGTGCAAGAAATTCTTTTCTGGCAGGCTCAGACAATGCAAATGATGTATACTGTCGTTGCTAAAGAATTGAAATCAATGCAACTTAATGACGTGCACCCACAAGATTACCTCAATTTCTATTGCCTTGGAAACCGAGAACATTTCAATGAAGAAAGCTCAGGCACAAATGGTGCACCGGTCTCTGGAGCATATAAATATCGCCGAAATATGATTTATGTGCATGCCAAGGGGATGATCGTGGATGATGAATATGTTATAGTCGGATCTGCCAACATAAACCAAAGATCTATGGCTGGTACTAAAGATACTGAGATAGCTATGGGTTCATATCAACCTCATTACACATGGTCTGCGAGGAAAAGACATCCACGTGGACAGATTTATGGTTACAGAATGTCACTTTGGGCAGAGCATCTTGGCATGTTAGATGAAACTTTTAAAGAACCAGAGAGATTGGAGTGTGTACGGAAAGTGAATGAAATTGCAACCAATAATTGGAGAATTTACTCTTCCGACGAATTGTCACTTATACAGGGACATCTTCTTAAGTATCCTGTACAAATTGATTCTGATGGGCTGGTCAGCTCATTACCCGACTGTGACAGTTTCCCAGATGCTGGTGGTAAGATATTGGGGGCTCATTCTGCCACAATTCCAGATATCTTAACAACGTAA 2574 0.427 MAETGADGNGFTSLHGDLDLTIIAARRLPNMDIVSERFRRCVTACDTIKYNSTSDAADEITHKEHRHRRKIITSDPYVTVMVPQATVARTRVLKNSPNPEWKERFNIPLAHSVADLEFRVKDDDVFGSQTMGTVKIPAQRVATGETISGWFPILGTNGKPPKQDTALHLEMKFTAVDQNPLYLRGIAADPEHKGVRHTYFPVRKGSLVRLYQDAHCPHGTVPEIELDNGNVYKPENCWEDICYAITEAHHMVYLVGWSIYHKVRLVREPSRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKVFFKSTGVMMTHDEETKKFFKHSSVMCVLAPRYASSKMSFIKQQVVGTVFTHHQKCVIVDTQASGNNRRISTFIGGLDLCDGRYDTPEHRLFRDLDTVFAGDFHNPTFPSGTRAPRQPWHDLHCRIDGPAAYDILINFEQRWRKATKWKEFAFLFKKASQWNDDALIRVERISWILSPSHRTSKDDYTTVPGDDPLVCVSKEDNPENWHVQIFRSIDSGSLKGFPKRVDVALSQNLICAKSLVIDKSIQTGYIQAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKIASKIRANEKFAIYIVLPMWPEGDPKSGAVQEILFWQAQTMQMMYTVVAKELKSMQLNDVHPQDYLNFYCLGNREHFNEESSGTNGAPVSGAYKYRRNMIYVHAKGMIVDDEYVIVGSANINQRSMAGTKDTEIAMGSYQPHYTWSARKRHPRGQIYGYRMSLWAEHLGMLDETFKEPERLECVRKVNEIATNNWRIYSSDELSLIQGHLLKYPVQIDSDGLVSSLPDCDSFPDAGGKILGAHSATIPDILTT* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3444 857 Pfam Phospholipase D C terminal 776 846 IPR024632 -
Psa2g3444 857 PANTHER PHOSPHOLIPASE D DELTA 12 857 - -
Psa2g3444 857 Gene3D C2 domain 14 184 IPR035892 -
Psa2g3444 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 356 391 IPR001736 GO:0003824
Psa2g3444 857 SMART pld_4 356 391 IPR001736 GO:0003824
Psa2g3444 857 SMART pld_4 702 729 IPR001736 GO:0003824
Psa2g3444 857 CDD C2_plant_PLD 14 174 - -
Psa2g3444 857 SMART C2_3c 17 150 IPR000008 -
Psa2g3444 857 PANTHER PHOSPHOLIPASE D 12 857 IPR015679 -
Psa2g3444 857 SUPERFAMILY Phospholipase D/nuclease 554 787 - -
Psa2g3444 857 SUPERFAMILY Phospholipase D/nuclease 195 462 - -
Psa2g3444 857 Gene3D Endonuclease Chain A 530 751 - -
Psa2g3444 857 ProSiteProfiles C2 domain profile. 1 151 IPR000008 -
Psa2g3444 857 Gene3D Endonuclease Chain A 224 475 - -
Psa2g3444 857 Pfam Phospholipase D Active site motif 702 729 IPR001736 GO:0003824
Psa2g3444 857 Pfam Phospholipase D Active site motif 356 391 IPR001736 GO:0003824
Psa2g3444 857 Pfam C2 domain 16 153 IPR000008 -
Psa2g3444 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 702 729 IPR001736 GO:0003824
Psa2g3444 857 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 174 IPR035892 -
Psa2g3444 857 PIRSF PLD_plant 4 857 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3444 Psa-Chr2 382119917 382133323 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3444 14 693 Phospholipase D Gene Family (Wang group) AT4G35790 70.803 0.0 1029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3444 K01115 - gmx:100801787 1491.09