Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3439 ATGGTGATCGAGAACGACATTGAGAGTTGCGGAAGTAGAGCGGTACAGTCGCACGCGAATCCTCGTCATCATCGTCAGAAACTTGAGGTGTACAATGAGGTGCTTCGTCGAATTCAGGATTCCGATTGTGAAGAGGCTCATGTTCCTGGTTTCGATGATCAGCTATGGCTTCACTTCAATCGTCTTCCTGCTAGGTATGCATTGGATGTGAATGTGGAGAGAGCAGAAGATGTTATTGCTCATAAGAGATTGCTCGAGTTGGCAGAAGATCCCGCTAATCGTCCTGCATTTCAAGTTCGTTTAGTACAGGTATATCCTTTTGGTAGTGCAAATCATAATGATTCTTCAATGCATTCAGATCATTCTGAGAAAGAAGATGCACAGAGTTCTCTTAACTACTCTTTAAAGCAGGGAATTCATGCACCACCTACTTTTGGTTCTTCCTCTAACCTTGAAGCTCTTGCACTTCAAACAAATAAAAATAACATTGAAGATGGAGACAATGCTATGGGTGTGACACCAAATTTTAACCGGCCCATGCACGAGATTACCTTTTCAACAATTGACAAGCCTAAACTTCTTAGTCAGTTAACTTCAATACTTGGTGAGGCTGGACTAAATATTCAAGAAGCTCATGCATTTTCCACCTCTGATGGGTTTTCCTTGGATGTCTTCGTCGTCGAGGGATGGCCTAATGAGGAAACTGAGGAGCTCAAAGGTGTGCTGGAAAAGGAAATTTGGAAGGTTAAGGACCAATATCTGTCAAATCAGGGCATACTATATTCCTTAAATGATCAACACCAGGCAAGGACGGAATCACCCCCTCATTGCATACAAATACCATCTGATGGAGCTGATGTCTGGGAAATTGATACCAGCCAGCTAAAATATGGAAACAAAGTTGGCTCTGGATCGTTTGGTGACTTGTTCAGAGGCACTTATTGCAGTCAAGATGTGGCTATCAAAGTTCTTAAGCCTGAACGCATAAATACAGATATGCTGAAAGAGTTTGCACAGGAAGTTTATATCATGAGGAAGATTCGACACAAGAATGTTGTTCAGTTCATTGGTGCATGTACTCGGCCACCAAATCTTTGTATTGTTACTGAGTTTATGTCTAGAGGAAGCTTATATGACTTTCTGCACAGACAACGGGGTGTGTTTAAACTTCCATCTTTAATAAAAGTAGCGATTGATGTTTCCAAGGGAATGAACTATCTGCATCAAAATAATATAATTCACAGAGATCTCAAGACTGCCAATCTTCTGATGGATGAAAATGAAGTAAGGGGATTCCTTGAATACACACATTGA 1314 0.4117 MVIENDIESCGSRAVQSHANPRHHRQKLEVYNEVLRRIQDSDCEEAHVPGFDDQLWLHFNRLPARYALDVNVERAEDVIAHKRLLELAEDPANRPAFQVRLVQVYPFGSANHNDSSMHSDHSEKEDAQSSLNYSLKQGIHAPPTFGSSSNLEALALQTNKNNIEDGDNAMGVTPNFNRPMHEITFSTIDKPKLLSQLTSILGEAGLNIQEAHAFSTSDGFSLDVFVVEGWPNEETEELKGVLEKEIWKVKDQYLSNQGILYSLNDQHQARTESPPHCIQIPSDGADVWEIDTSQLKYGNKVGSGSFGDLFRGTYCSQDVAIKVLKPERINTDMLKEFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMSRGSLYDFLHRQRGVFKLPSLIKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVRGFLEYTH* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3439 437 Gene3D Transferase(Phosphotransferase) domain 1 371 434 - -
Psa2g3439 437 ProSitePatterns Protein kinases ATP-binding region signature. 301 322 IPR017441 GO:0005524
Psa2g3439 437 CDD ACT_TyrKc 180 246 - -
Psa2g3439 437 ProSiteProfiles Protein kinase domain profile. 295 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3439 437 ProSiteProfiles ACT domain profile. 182 262 IPR002912 -
Psa2g3439 437 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 15 427 - -
Psa2g3439 437 Pfam Protein tyrosine and serine/threonine kinase 295 428 IPR001245 GO:0004672|GO:0006468
Psa2g3439 437 SMART serkin_6 295 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3439 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Psa2g3439 437 SUPERFAMILY Protein kinase-like (PK-like) 275 427 IPR011009 -
Psa2g3439 437 Gene3D Phosphorylase Kinase; domain 1 285 370 - -
Psa2g3439 437 SUPERFAMILY ACT-like 180 245 IPR045865 -
Psa2g3439 437 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 15 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3439 Psa-Chr2 381701965 381712072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3439 2 429 MAP Kinase Kinase Kinase AT4G35780 67.593 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Psa2g3439 PK_Tyr_Ser-Thr 2.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3439 - - gmx:100816767 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3439 2 381701965 381712072 Psa2g3439 2 381701965 381712072 ECH
Psa4g2172 4 175443132 175444091 Psa2g3439 2 381701965 381712072 PCT