Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3438 ATGAAAACAATGACAGCAACGTCGTTTGATGTCTCCGCCGCTTGCTTCCATTCCCGCCCTCTAAATCTACGCCGTAACACGACCATGACTAGTTTTTCGTTTGTAAAATCCTCCAACTTTAACAAGGGACAACGAAGCGTTGTTGTTCAACCAAAGTTTTTGAACTTCCGCATGATGAGTAGTTTAAAGGGGAATTTGGAGGAGGTTGTTGGAGTTCCAACTTCAGTGCCGGTGCGTGTAGCTCACGATCTTTTTCTAGCTGGCCATAAGTATCTTGATGTAAGGACCACGGAAGAGTTTAATGCTGGACATGCACCTGGGGCAATTAACATACCTTATATGTATAAAGTTGGATCAGGGATGACAAAGAATAGCAATTTTGTTAAAGAAGTCTCTTCACATTTTAGAAAAGAAGATGAAATTATTGTTGGGTGTCAACTTGGTAAAAGGTCTATGATGGCTGCTACTGACTTGTTAACTTCTGGGTTCACTGGAGTCACAGACATAGCTGGTGGTTATGCTGCTTGGACCCAAAATGGACTTCCTACAGAAAGATGA 558 0.4211 MKTMTATSFDVSAACFHSRPLNLRRNTTMTSFSFVKSSNFNKGQRSVVVQPKFLNFRMMSSLKGNLEEVVGVPTSVPVRVAHDLFLAGHKYLDVRTTEEFNAGHAPGAINIPYMYKVGSGMTKNSNFVKEVSSHFRKEDEIIVGCQLGKRSMMAATDLLTSGFTGVTDIAGGYAAWTQNGLPTER* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3438 185 CDD RHOD 92 176 - -
Psa2g3438 185 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 1 184 - -
Psa2g3438 185 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 72 184 IPR036873 -
Psa2g3438 185 ProSiteProfiles Rhodanese domain profile. 85 185 IPR001763 -
Psa2g3438 185 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 1 184 - -
Psa2g3438 185 Gene3D - 63 184 IPR036873 -
Psa2g3438 185 SMART rhod_4 75 182 IPR001763 -
Psa2g3438 185 Pfam Rhodanese-like domain 91 178 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3438 Psa-Chr2 381668208 381669407 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3438 67 182 Sulfurtransferasese or Rhodanese AT5G66170 45.763 1.30e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3438 - - aprc:113868825 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3438 2 381668208 381669407 Psa4g2347 4 189809751 189812191 PCT