Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3436 ATGATATTTTCACTGAACAAGGCTGAACGAACACGAAGGATTCACGGACCATCGACATTCAACCCTCATTTGGAAACTGGCTGCAAACTTAGTGTTGCTGAGTGGCTTTATGCTTTGTGCTCTATGGAACGCATGGGCGCCTTGCAATCTTTGTGGCTGGCGTTACAATGCCCCTTTCTATGCCTTATGTTATTCCAAGGCCAAGAGGAAAACAGTGCCGACAATTTATCCATGCGTTTGGCCAATGATGCTACTTTTGTGAGAGCTGCTTTCAGTAACCGGCTTTCCATATTTATACAGGACATTGCCGCAGTTATTGTTGCTTTTCTCATTGGTGTTTCGCTGCACTGGAGAATAGCTCTCGTGGCTTTGGCAACACTTCCGATTCTCTGTGTTTCTGCTATTGCCCTGAAATTGTGGCTTGCTGGTTTTTTCAAGGGGCATACAGGAAATGCACCGAAAAGCATTTTTGGTTCTTGA 480 0.45 MIFSLNKAERTRRIHGPSTFNPHLETGCKLSVAEWLYALCSMERMGALQSLWLALQCPFLCLMLFQGQEENSADNLSMRLANDATFVRAAFSNRLSIFIQDIAAVIVAFLIGVSLHWRIALVALATLPILCVSAIALKLWLAGFFKGHTGNAPKSIFGS* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3436 159 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 70 146 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa2g3436 159 SUPERFAMILY ABC transporter transmembrane region 69 146 IPR036640 GO:0005524|GO:0016021
Psa2g3436 159 Gene3D ABC transporter type 1, transmembrane domain 44 151 IPR036640 GO:0005524|GO:0016021
Psa2g3436 159 Pfam ABC transporter transmembrane region 71 146 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa2g3436 159 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 68 147 IPR039421 -
Psa2g3436 159 PANTHER BILE SALT EXPORT PUMP-RELATED 68 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3436 Psa-Chr2 381572822 381574720 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3436 68 144 Calmodulin-binding Proteins AT2G36910 38.961 4.34e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3436 K05658 - gmx:100819266 142.124