Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3393 ATGGACCCTTCCAAGAACACAACTTCTACCCCAAACAACTTTCCCCCGGATTCCTCTCCACACTCTCCATCTGAACATGATAACACCCCCACTGAAACAAACCCTATCCCTGAGACCGAGGGTTCTTCTGAAAATGTTATCATGAAAACTGCTGAGGAAGTTTGGGCTGAGTTAACTGCGGGTGATGATGAAATATACGGAAATGAAAGTGGTGATGGTGGTAATGAAGACGGCGGAGAGCAGGATGGCGATGCCTCTAGGCCTTTGGTGATCGCCGTTACTGCGGACGGTGCAAATGTGCCTGTGATGGGAAGTGGTGGTGGTGCTGGTGGTAGTGATAAGGGCTCGAAGAAAAGAAAAAGTAATCAAGTTAGAAACCCTCCTCAAGGAACTCCAACTTGTCCAGAATGTAGAAGACAGTTTGCGACATGGAAGGCAGCGTTTGGACACATGCGAAAACACCCTGAACGCCTGCACCGTGGTTTCTTTCCGCCACCTACTTTTGAACCACCACAATTGCCTGCGGCGGGTGATGGTGGTAATCAGGTGGATGAAGAAGTGCAACATGTTGTTAGAGGACTTGTTGTTGATTTGAATCGCTCCCTTGTAGCAGAGGAAGGGCCTTCTGCCGGCGGCGGCAGTGGAGGAAAAAAGAGAAGCCAACCAGCGGGGTCCGCCGCAGCACTTGGACCACCACTTCCACCATCACAGAGTGGGAATAGGAGAAATGAACCAGCACCACTTGAAGCGGCTGATGATGAAAATGAAGAAGGGATAAGAAAATTTGATTTGAACAGGTTACCTTCTTCAGATGATGATGAAAGCGGAGAGAATTGA 837 0.491 MDPSKNTTSTPNNFPPDSSPHSPSEHDNTPTETNPIPETEGSSENVIMKTAEEVWAELTAGDDEIYGNESGDGGNEDGGEQDGDASRPLVIAVTADGANVPVMGSGGGAGGSDKGSKKRKSNQVRNPPQGTPTCPECRRQFATWKAAFGHMRKHPERLHRGFFPPPTFEPPQLPAAGDGGNQVDEEVQHVVRGLVVDLNRSLVAEEGPSAGGGSGGKKRSQPAGSAAALGPPLPPSQSGNRRNEPAPLEAADDENEEGIRKFDLNRLPSSDDDESGEN* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3393 278 PANTHER TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE 3 277 - -
Psa2g3393 278 MobiDBLite consensus disorder prediction 1 46 - -
Psa2g3393 278 MobiDBLite consensus disorder prediction 1 137 - -
Psa2g3393 278 MobiDBLite consensus disorder prediction 159 188 - -
Psa2g3393 278 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 3 277 - -
Psa2g3393 278 MobiDBLite consensus disorder prediction 246 278 - -
Psa2g3393 278 ProSitePatterns Zinc finger C2H2 type domain signature. 134 154 IPR013087 -
Psa2g3393 278 MobiDBLite consensus disorder prediction 205 278 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3393 126 183 C2H2 Transcription Factor Family AT4G35280 50.000 2.66e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Psa2g3393 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3393 - - mtr:MTR_5g023910 173.326