Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3391 TTAAACGCTGAAACACTCGCTCCTGTCAAAGCTGGTTCAGGAATGATGGTGGCTATCAAGAAAATGAAACCTGATAGTTTGCAAGGTGTTCAAGAATGGCAGTCAGAAATCAACTTTTTAGGAAGCATTTCCCATCCCAACTTGGTCAAGCTACTTGGTTATTGTAGGGAGAATGATGAACTTCTCTTGGTGTATGAGTTTATGCCAAGGGGAAGCTTGGAAAGCCATCTATTTAGAAGAAATACTAACAGAGAGCCATTTTCTTGGAAAACCCGTCTCAGAATAGCTATTGACGCAGCCAGAGGTTTGGCTTTCTTGCATTCTTCAGAAAAACAAGTCATATACAGAGATTTTAAGGCTTCTAATATACTTCTTGATGGGAATTACAATGCAAAGATTTCAGATTTTGGATTGGCTATATTTGGACCATCAGGGGGAGATTCACACGTGACTACTAGGATCATGGGCACACATGGTTATGCTGCCCCAGAATACATTGCAACAGGTCATTTGTATGTGAAGAGTGATGTTTATGGATTTGGTGTTGTGCTACTTGAAATGTTGACAGGATTGCAAGCACATGATTCAAAAAGGCCTTCAGAGCAGCAGAATCTGGTTGAATGGATTAAGCCTTCTCTCCCGGATAAAAGAAAGTTGATAAGTACCATAATGGATTGTAGGTTAGAGGGCCAATATTCACCAAAGGCAGCGTTAGAAACAGCTAAGCTTATTCTTAAATGCCTTGAATCTGACCCTAGAAAACGTCCTTCTATGAATGATGTTTTGGAGACATTGGAAGGCATAAGAGCTATTAAGGATAGAAGGAAGATGTCCAAGAATCGCTGCACTAAGTCTGCAGCTACTTAG 867 0.4048 LNAETLAPVKAGSGMMVAIKKMKPDSLQGVQEWQSEINFLGSISHPNLVKLLGYCRENDELLLVYEFMPRGSLESHLFRRNTNREPFSWKTRLRIAIDAARGLAFLHSSEKQVIYRDFKASNILLDGNYNAKISDFGLAIFGPSGGDSHVTTRIMGTHGYAAPEYIATGHLYVKSDVYGFGVVLLEMLTGLQAHDSKRPSEQQNLVEWIKPSLPDKRKLISTIMDCRLEGQYSPKAALETAKLILKCLESDPRKRPSMNDVLETLEGIRAIKDRRKMSKNRCTKSAAT* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3391 288 PIRSF ILK 8 284 - -
Psa2g3391 288 ProSitePatterns Serine/Threonine protein kinases active-site signature. 113 125 IPR008271 GO:0004672|GO:0006468
Psa2g3391 288 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 1 280 - -
Psa2g3391 288 Gene3D Phosphorylase Kinase; domain 1 8 68 - -
Psa2g3391 288 PANTHER OS01G0588500 PROTEIN-RELATED 1 280 - -
Psa2g3391 288 Pfam Protein kinase domain 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3391 288 ProSiteProfiles Protein kinase domain profile. 1 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3391 288 Gene3D Transferase(Phosphotransferase) domain 1 69 284 - -
Psa2g3391 288 SUPERFAMILY Protein kinase-like (PK-like) 13 273 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3391 Psa-Chr2 379901660 379955542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3391 13 265 Glycoside Hydrolase AT3G07070 48.031 7.55e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Psa2g3391 Pkinase 5.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3391 - - gmx:100778116 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3391 2 379901660 379955542 Psa2g3391 2 379901660 379955542 ECH