Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3389 ATGGATTCCTCGCTCACTAACCTACTTCTCTTCAACAACACCGTTCAACCAGAGTTGATGAGAAGCGTGCATGTGTACCGTGCTGAATGCGATGGAGAAGAAACGGAAGTTGAACGAGAGTTTGTGTTTTCTGAAACTGCTTCCTACGTTGAAATGCAAGCTACTCCGATTTTCACATTGTTGAAATCTTTTGTGTGTCGAGAAATTTCTCAAGGGGATAAGAATGGAGTTTGGCTTTGTGTTTTTGCTTTTCATGCTTGTAATTCGCCTCAATTTTCTCACATTCCAACTCTCTTGTTGGTTACAAGAAATCCAAAGCTTCTTGCTATTCCAAACTTGCTTAATGATCTCCAAATGATATACAAGTTGAACCCAAAGCAGGAACAGAGTGAAATACCAGACGACTCTACAATGGACGAACCAAAAGGAAATAACAATGAACGCAAACCAGCGAAAAAAGTCTCGCTGGTGTTTGAACAAGATCTCAATTATCTTCCTTATGAAAAAGATGAGCCTGAGTTATTGGATGACGGGACAGATTTTGAAAGTTCTTCAGGTTTTGTAGGAAAGAAAAAGAGGGCACCAAGTTACCATGTAGCAAAAATTACCTTATCAGATTTAGTCAAGTACTTTGATATGCCAATTGCAGAAGCGTCAAAAAAACTAAATGTTGGCCTTACTGTTCTCAAAAGAAAGTGCAGAGAATTTGGTATTCCTCGCTGGCCTCATAGGAAGATCAAATCACTTGACAGCCTCATTCAAAATCTTCAGGAAGAGGCAAAACATCAGGAAATGGAGAACAAAGCTGCAGCAATGGCAGCGCTAAAGAGGCAAAAGATGTTGGAAAGTGAAAAGGAAAACATAGAGAAGAGGCCTTTCATGGATATACGAAGTGAGACTAAGAGATTCAGACAAGATATTTTCAAGAGAAGACACAGAGCTAGAGTCATTGAAAAACAGAATTCTACAGTAGCAAGCACTTAG 984 0.3943 MDSSLTNLLLFNNTVQPELMRSVHVYRAECDGEETEVEREFVFSETASYVEMQATPIFTLLKSFVCREISQGDKNGVWLCVFAFHACNSPQFSHIPTLLLVTRNPKLLAIPNLLNDLQMIYKLNPKQEQSEIPDDSTMDEPKGNNNERKPAKKVSLVFEQDLNYLPYEKDEPELLDDGTDFESSSGFVGKKKRAPSYHVAKITLSDLVKYFDMPIAEASKKLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIQNLQEEAKHQEMENKAAAMAALKRQKMLESEKENIEKRPFMDIRSETKRFRQDIFKRRHRARVIEKQNSTVAST* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3389 327 MobiDBLite consensus disorder prediction 128 150 - -
Psa2g3389 327 PANTHER PROTEIN RKD5 7 320 - -
Psa2g3389 327 Pfam RWP-RK domain 201 249 IPR003035 -
Psa2g3389 327 PANTHER PROTEIN RKD4 7 320 IPR044607 GO:0003700
Psa2g3389 327 ProSiteProfiles RWP-RK domain profile. 184 269 IPR003035 -
Psa2g3389 327 Coils Coil 246 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3389 Psa-Chr2 379662515 379666098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3389 15 327 AtRKD Transcription Factor Family AT4G35590 48.936 2.04e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Psa2g3389 RWP-RK 5.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3389 - - gmx:100306328 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3389 2 379662515 379666098 Psa2g3389 2 379662515 379666098 ECH