Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3376 ATGGCACCAGGGAATTATTGCAGCTCTCAGGTAGTAGCTATATTAAAAGGTGGTGAGTGTTCCATGGAGGATCAAAATGATGATACTTTGGGGAATTTGAATCAGAATATTGCTGGCAAACCTCCAAGGGATCATTCTGTTAGTATGCGCCATTGCACCAGCTCTTCATGGTTGGCTGATTCGGAATCAAATATTAATAGCGTTGGCATTAAATCAAACACAGAAGATAAATCAGAGTTTCCTCTTATATTAAGATCTGGAAGTTGTTCTGAGAAAGGACCAAAGCAATACATGGAGGATGAGTTTGTATGTGTTGATATTCTTCTTGAATGTAAACGTGTTGCTCAACAACTAGACCTTCCATCTCCATCAGCATTTTATGGGATATTTGATGGACACGGTGGCGTTGATGCCGCATCATTTATCAAAAAGAACATATTTAACTTTATAATTGAAGATTCTCAATTCCCATCTAGCATTAAGAAAGCAGTTAAGAATGCATTTGTGAAAGCTGATCATGCATTTAGAGATGCCGGTACACTTGATAGTTCTTCAGGAACCACAGCTCTAATAGCCCTTGTCTTGGGAAGGGCCGTGCTGATTGCGAATGCAGGAGATTCGCGCGCGGTACTAGGGAAACGCGGCCGAGCAGTTGAACTTTCAAAAGACCATAAACCAAATTGCACTTCTGAAAGATTAAGAATTGAAAAACTAGGTGGTGTTATCTATGATGGATACCTAAATGGACAACTATCAGTGGCACGTGCGCTAGGAGATTGGCACATAAAAGGTTCAAAAGGTTCAAAGAGTCCCTTAAGCTGTGAGCCAGAGTTAGAGGAAATTGTTGTAACAGAAGAAGATGAGTTTTTGATACTAGGGTGTGATGGATTATGGGATGTTATGAGTAGTCAATGTGCTGTTACAATGGTTAGGAAGGAACTTGTGCAGCATAATGATCCTAACATATGTGCTAAGGTACTTGTTACTGAGGCACTTCAAAGAAACAGTTGTGATAATCTAACAGTTGTTGTGGTTTGTTTCTCTAAGGATCCACCTTCTAAAATTGAAATTCCTAGATCACATAGGAGAAGGAGTATTTCTGCTGAAGGTCTTGATCTTCTCAAAGGTGTTTTGAATGGTAGATGA 1146 0.397 MAPGNYCSSQVVAILKGGECSMEDQNDDTLGNLNQNIAGKPPRDHSVSMRHCTSSSWLADSESNINSVGIKSNTEDKSEFPLILRSGSCSEKGPKQYMEDEFVCVDILLECKRVAQQLDLPSPSAFYGIFDGHGGVDAASFIKKNIFNFIIEDSQFPSSIKKAVKNAFVKADHAFRDAGTLDSSSGTTALIALVLGRAVLIANAGDSRAVLGKRGRAVELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSCEPELEEIVVTEEDEFLILGCDGLWDVMSSQCAVTMVRKELVQHNDPNICAKVLVTEALQRNSCDNLTVVVVCFSKDPPSKIEIPRSHRRRSISAEGLDLLKGVLNGR* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3376 381 Gene3D - 66 352 IPR036457 -
Psa2g3376 381 SUPERFAMILY PP2C-like 79 348 IPR036457 -
Psa2g3376 381 PANTHER PROTEIN PHOSPHATASE 2C 21 369 IPR015655 GO:0004722|GO:0006470
Psa2g3376 381 SMART PP2C_4 75 345 IPR001932 -
Psa2g3376 381 Pfam Protein phosphatase 2C 86 339 IPR001932 -
Psa2g3376 381 CDD PP2Cc 85 347 IPR001932 -
Psa2g3376 381 ProSitePatterns PPM-type phosphatase domain signature. 126 134 IPR000222 GO:0043169
Psa2g3376 381 ProSiteProfiles PPM-type phosphatase domain profile. 85 347 IPR001932 -
Psa2g3376 381 PANTHER PROTEIN PHOSPHATASE 2C 47-RELATED 21 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3376 Psa-Chr2 378838542 378840778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3376 69 379 PP2C-type Phosphatase Gene Family AT3G51470 74.920 4.69e-171 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3376 K14803 - gmx:100781874 588.186