Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3363 ATGTCGTGTTCGTCTTCATCGGGATCGGAAGATGATAATGAAGGGTTTGAGTCTTATCGGAAAGGTGGGTACCATGCCGTTAGAGTCGCCGATAGTTTCGCGGCTGGTAGGTATATAGCTCAGAGGAAGCTTGGTTGGGGTCAATTCTCCACCGTCTGGCTTGCTTATGATACTATCACCTCTTCATATGTTGCTCTCAAAATCCAGAAAAGTGCGGCCGACTTTGTTCAGGCTGCCCTCCACGAGATCGATGTTCTTTCATCCATTGCTGACGGTGATCCATCAAATTCAAAGTTTGTTATTCAATTGATTGATCACTTTAAGCACGCAGGTCCCAATGGGCAGCACCAGTGCATGGTCCTTGAATTTCTCGGCGATAGCTTGCTTCGTTTGATCAGATATAACCGTTACAAAGGTCTTCCACTGAATAAAGTTAGAGAGATATGTAAATGCATTTTGATTGGTTTGGATTACTTGCATAGTGAACTTGGTATAATCCACACTGATTTAAAACCTGAAAACATTCTTCTATTTTCAACTATTAACCCTGCCAAAGATCCTTTTAGTTCTGGTTGCTCCCCAATTTTAGAACGGCCCGTGGGAAACACAAACGGTGGACTTCCAAGTCTTATTGAGAAAAGGTTGAAGAGGAGAGCAAGGAGTGCAGTTGCTAAAATATCAGGAAGAACAGCCTCAATTGAAGGAAGAGGAGAGGCGACAAAATCTCGTAGAAATATTGATGGGATTGACGTGAGATGCAAGATTGTCGATTTTGGAAATGCGTGTTGGGATGATAAGAAGTTTGCAGAAGAAATACAAACAAGGCAGTATAGAGCCCCTGAAGTTATACTGAAGTCCGGTTATTCCTTCTCTGTTGACATGTGGTCTTTTGCTTGCATTGCTTTTGAGCTTGCCACCGGAGATATGTTATTTGCACCCAAAGTTGGAAAAGATTATAGTGAGGATGAGGATCATCTCGCCCTGATGATGGAACTCCTAGGAAAGATGCCGCGGAAGATTGCTACTAGTGGAGCTCAATTCAAGGACTACTTTGACAGGCACGGTGATCTAAAAAGGATTCGAAGGCTAAAATATTGGCCACTTGACAAACTACTAATTGATAGATATAAATTTTCAGTGACCGATGCTCGTGAGTTTTCAGAATTTCTCTTGCCACTTTTTGATTTCGCGCCAGAAAAACGACCAACTGCACGACAATGCCTGCAACTCCCCTGGCTGAACTGCAAGGAGTCATCACCAAATGAAACAAGAAACGAATCTACCGTCGAAAAGGTTAATGTTGGTATGAGCAACCTTCAAATCAAGGTAGGAAAGTGA 1338 0.4275 MSCSSSSGSEDDNEGFESYRKGGYHAVRVADSFAAGRYIAQRKLGWGQFSTVWLAYDTITSSYVALKIQKSAADFVQAALHEIDVLSSIADGDPSNSKFVIQLIDHFKHAGPNGQHQCMVLEFLGDSLLRLIRYNRYKGLPLNKVREICKCILIGLDYLHSELGIIHTDLKPENILLFSTINPAKDPFSSGCSPILERPVGNTNGGLPSLIEKRLKRRARSAVAKISGRTASIEGRGEATKSRRNIDGIDVRCKIVDFGNACWDDKKFAEEIQTRQYRAPEVILKSGYSFSVDMWSFACIAFELATGDMLFAPKVGKDYSEDEDHLALMMELLGKMPRKIATSGAQFKDYFDRHGDLKRIRRLKYWPLDKLLIDRYKFSVTDAREFSEFLLPLFDFAPEKRPTARQCLQLPWLNCKESSPNETRNESTVEKVNVGMSNLQIKVGK* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3363 445 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Psa2g3363 445 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Psa2g3363 445 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 5 445 - -
Psa2g3363 445 SUPERFAMILY Protein kinase-like (PK-like) 33 415 IPR011009 -
Psa2g3363 445 CDD STKc_SRPK 27 413 - -
Psa2g3363 445 SMART serkin_6 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3363 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Psa2g3363 445 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 445 - -
Psa2g3363 445 Pfam Protein kinase domain 252 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3363 445 Pfam Protein kinase domain 39 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3363 445 ProSiteProfiles Protein kinase domain profile. 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3363 445 Gene3D Transferase(Phosphotransferase) domain 1 92 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3363 Psa-Chr2 378473035 378476786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3363 1 414 EF-hand Containing Proteins AT5G22840 50.429 1.06e-163 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Psa2g3363 Pkinase 1.8e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3363 K08832 - gmx:100784192 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0268 5 19767533 19785007 Psa2g3363 2 378473035 378476786 ECH
Psa2g3363 2 378473035 378476786 Psa2g3363 2 378473035 378476786 ECH
Psa2g3363 2 378473035 378476786 Psa4g2460 4 196499068 196502979 PCT