Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3361 ATGAGGCCGGGTTCGCAACTTGAAAACGGTGAGTCCGATGACACGCACGCGTTTCATGAATCTAACACGTGCAGTAGAAAGGGATGTGCAGGAGAAGCCTTCGATGGGAAATTACTTGGGTCACGTGGGTTTGGTGGGTGGAGCTCTCAAACCAAGTGGAATGGGCCAAGTGGATTTGGGTTAAAAGATGTGGGCTGGAATAAAACAAATGTCTGGGTAGTGGTTAAAGGAGCAAGAGATGAACCTGATAAAGAGGAAACAATCAACAACCCAAAGTTTGAGGTACGCCCCGAAAGAAGACAATCGGGTCAACGTGAAAAAGGAATACAACGTCTCACATCACAAGAAATCGCGGATCGCAAACAGAAAGGATTGTGTTTTCAATGCAATGAGAATAAAGGAGCTGGTGCTTTGTCTCAAATGCATGATAGTTTGGAGCTACAATCCTTATTACATTATCCGACATGGTTGGGGTTTGATGAAGTGTTAAAAGAGGTGCATGTTGATGTTGTGTTACAGAAGATCATTACGACCTTGGAGAAAGGTGAACAGACAAAACCATGGTTTTCTTATCGTAGAGGGGTTTTGTTCTATGAGGGTGAACAGACAAAACCATGGTTTTCTTATCGTAGAGGGGTTTTGTTCTATGAGGACCGTTTAGTGTTACCTTCAAATTATGTGTGGATTCCTAAGTTGTTATTAGAGTTCATTCCTCTCCTCAAGGTGGTCATTCTGGCAATTGGCAATTACAGGGTCGAAAAAGAACTGCCGAGTGGGTTGGATGTGGATCCAGGAGGAGTGTGGGAACCCGCAAAAGTTCTGGCTACCAGGTCTGTTACCAAAGACAAGGAACTTGTGCAACAACTATTGATACATTGGAAATGCCGCTATGTGGAAGAAGCTACATGGGAGGGCGAGTTTAATATGCGTAGTCAGTTTCCAGCTTTCAAACTTGAGGACAAGTCTGCTGACAGGAGTATTGATAGAGATGTGGGGGAAAGAAGAGAGAGGTTATGGAGAAGTTTATTACATTTTTCTGTTAGCAGAGATGTGAGTTCTTTGAGGAGCCTAGCTCTAAAACCTGCCACGGCGCTCGTTGCTGCCCTAGACGGTACTGTTTATCTAGTTGAAAGTGCTTCCGGGAGGGTAATTTGGTCTTTTTCAACTGGATCCCCAATCTACCATTCCTCCGCCAACACTCCGTCTTCTGGACTCATCGAATGTGGTGATGACTGGGAGTTAATCTTCCACGATACACACTTTGGCAAAACGAGGCTTAAGGAATCTGTTGCTGATTATGTTGCTGTTACACCTATTGTGTCTAAAGATGGAGCTGTTATACTTGGATCCAAAAGAAGCACTGTATTTGAAGTCGATGCCAAAGCTGGAAAGCTCCTTAGAAGTTATGGTGCTGCTGATTTTCATAATGCTTCTACTACTGCAGTGTGGAGTGGTGACGAGGACAGGGAGAGAGTTAGTACTGTCGTCGGTGCGAATAATAACGAGCTTGCTGATCCAGGAAAGCTCAATTTACCGGAGTTCTTGCTCCAGATAGTTAGGACCGATTATTTTTTACAATCTGTGGGTCCTGGTTCAGGAATAGTGTTGTGGACTATGTCAGTAGCTGAATTTGAGGCTGTATTATTTTGCAAACGTAATGAAATTCCTACCTTCAAGGCTTCCCTTGATGCAGGGGAGTATGCTTCTGATGTTGACAGTGGCTTGGATTTTGCTATGCCGTATGCATGTCCAGACAGTAAACTCAGAGAAGTCTATCGTCAGCGAAAGAATTTTCTGTTTGAACCTGTTAACTTTGAAAGATTATCTGATGTTAGTTCCTATCAAGAAAATGGTATGCTCCTGATGCCGGTTTCTCATCTGATGCTTCCATCACAACCTAAGAGTGAAAAATTCCTCCCAGGTCACAATGGTAATATGATGCTTCCTGGGCCTGTGCCAAATTCTTTGCAGCCAGAAATCAGCTTCTATGATAGTAATGATAATAATGCAGTTGTGCTCCCTCAGCCGCATATGGAAATTGCTGCACCAAGGGAAATTGATGTGAACCGGGTGATTGAGTTGTCAATGACATTATTGGCTGTATTATCTGTGGTCTTTCTTCTGATATTTTACCAAAACCGATCTACAAATAAAGCTACATCAAAGGTCCAAATCAGTGACTCAGATTTGAAAAGCCCGCCTTCTAAGAAAAAGAGAGCACGTAAGTCAGGAAAAAACAATGTCATTGTTGAAAAACAGAATAATCATCTGTATTCAGTTGAGGAGAATATACGAATATATAAGGAAGCAGAAAATGAAGCACGGTTGCTGTATAGTAAAGTTAACGGACGCAGGATCGGTAAACTGCATGTATCTAATAGAGAAATAGCGAAGGGAAGTAATGGTACCATTGTTCTTGAGGGGATATATGAAGGCCGATCAGTTGCTATCAAACGTCTTGTTCAGGCTCATCATGATGTAGCTCATAAAGAAATCCAAAATCTAATTGCTTCTGACTTTCATCCAAATATTGTCCGATGGTACGGCGTGGAATATGATCACGATTTTGTTTACCTTGCTCTGGAACGTTGTGCATGCAACTTGGATGATTTGATTAGTATTTATTCAGACATGTCAGAAAATCCAGTGCTAAACAAGGATCGAGCTTTTGAATTTTTCAAGAAGGCACAGATAGAGACACAGTGGGATGATACACAGTGTCTTTGGAAAACAAATGGTTATCCATCTCCTCTTTTACTAAAGCTGATGAGGGATGTGGTTTCTGGGCTTGTTCATTTGCACGAACTAGGAATAATACATCGCGATTTGAAACCCCAAAATGTTTTGATAATCAAGGAAAGATTATTATGTGCCAAGCTTTCTGATATGGGGATTAGCAAGCGGCTTCTTGAAGATATGTCTTCATTAGGCCATAGCTCTACTGGCTGTGGCAGTTCGGGTTGGCAAGCCCCCGAGCAGCTTCTTCAGGGACGTCAAACACGGGCTGTGGATTTGTTTAGTTTAGGTTGTGTCCTCTTTTTCTGTATGACAGCAGGTAGACATCCATTTGGAGAACGTCTTGAGCGTGATGTCAATATTGTTAAAAATAAAAAAGATCTTTTCTTAGTGGAGTTCTTTCCTGAAGCTGAGGATCTTGTTTCTCGTTTATTAAACCCTGACCCCAATCTAAGGCCAAAGGCGATTGAAGTATTGCATCATCCTCTATTTTGGAATTCTGATATGAGACTTTCATTTCTCCGTGACGTTAGTGACAGGGTGGAACTTGAAGATAGAGAGACTAACTCTGATCTTTTAAATGTATTAGAGAGCACAGCTCCAGTAGCTTTAGGTACAAAATGGGACGAAAAGATGGAACCTGCTTTCCTTGCTAACATTGGTCGTTACAGGCGTTATAAATTTAATAGTGTTCGAGATTTGTTGAGGGTCTTGAGAAACAAGCTAAATCATTTTAGAGAATTGCCTCTAGAAATTCAGGAACTGATAGGACCTATTCCAGAAGGATTCAATGAGTACTTTACAAGTCGATTTCCAAGGCTCTTGATTGAAGTGTACAAAGTTATCTGCAATTATTGCAAAGATGATGAATGTTTTCAAAGATATTTTAGAGACATTGATTAA 3639 0.4152 MRPGSQLENGESDDTHAFHESNTCSRKGCAGEAFDGKLLGSRGFGGWSSQTKWNGPSGFGLKDVGWNKTNVWVVVKGARDEPDKEETINNPKFEVRPERRQSGQREKGIQRLTSQEIADRKQKGLCFQCNENKGAGALSQMHDSLELQSLLHYPTWLGFDEVLKEVHVDVVLQKIITTLEKGEQTKPWFSYRRGVLFYEGEQTKPWFSYRRGVLFYEDRLVLPSNYVWIPKLLLEFIPLLKVVILAIGNYRVEKELPSGLDVDPGGVWEPAKVLATRSVTKDKELVQQLLIHWKCRYVEEATWEGEFNMRSQFPAFKLEDKSADRSIDRDVGERRERLWRSLLHFSVSRDVSSLRSLALKPATALVAALDGTVYLVESASGRVIWSFSTGSPIYHSSANTPSSGLIECGDDWELIFHDTHFGKTRLKESVADYVAVTPIVSKDGAVILGSKRSTVFEVDAKAGKLLRSYGAADFHNASTTAVWSGDEDRERVSTVVGANNNELADPGKLNLPEFLLQIVRTDYFLQSVGPGSGIVLWTMSVAEFEAVLFCKRNEIPTFKASLDAGEYASDVDSGLDFAMPYACPDSKLREVYRQRKNFLFEPVNFERLSDVSSYQENGMLLMPVSHLMLPSQPKSEKFLPGHNGNMMLPGPVPNSLQPEISFYDSNDNNAVVLPQPHMEIAAPREIDVNRVIELSMTLLAVLSVVFLLIFYQNRSTNKATSKVQISDSDLKSPPSKKKRARKSGKNNVIVEKQNNHLYSVEENIRIYKEAENEARLLYSKVNGRRIGKLHVSNREIAKGSNGTIVLEGIYEGRSVAIKRLVQAHHDVAHKEIQNLIASDFHPNIVRWYGVEYDHDFVYLALERCACNLDDLISIYSDMSENPVLNKDRAFEFFKKAQIETQWDDTQCLWKTNGYPSPLLLKLMRDVVSGLVHLHELGIIHRDLKPQNVLIIKERLLCAKLSDMGISKRLLEDMSSLGHSSTGCGSSGWQAPEQLLQGRQTRAVDLFSLGCVLFFCMTAGRHPFGERLERDVNIVKNKKDLFLVEFFPEAEDLVSRLLNPDPNLRPKAIEVLHHPLFWNSDMRLSFLRDVSDRVELEDRETNSDLLNVLESTAPVALGTKWDEKMEPAFLANIGRYRRYKFNSVRDLLRVLRNKLNHFRELPLEIQELIGPIPEGFNEYFTSRFPRLLIEVYKVICNYCKDDECFQRYFRDID* 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3361 1212 PANTHER IRE1-RELATED 348 1208 IPR045133 GO:0004521|GO:0004674|GO:0030968
Psa2g3361 1212 Gene3D - 329 554 IPR015943 GO:0005515
Psa2g3361 1212 Gene3D Phosphorylase Kinase; domain 1 777 862 - -
Psa2g3361 1212 CDD RNase_Ire1 1081 1208 - -
Psa2g3361 1212 ProSiteProfiles Protein kinase domain profile. 790 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3361 1212 Gene3D Transferase(Phosphotransferase) domain 1 905 1078 - -
Psa2g3361 1212 Pfam Ribonuclease 2-5A 1082 1208 IPR010513 GO:0004540|GO:0006397
Psa2g3361 1212 SUPERFAMILY Protein kinase-like (PK-like) 794 1082 IPR011009 -
Psa2g3361 1212 MobiDBLite consensus disorder prediction 1 20 - -
Psa2g3361 1212 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 343 484 IPR011047 -
Psa2g3361 1212 Pfam Protein kinase domain 793 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3361 1212 Gene3D KEN domain 1080 1211 IPR038357 -
Psa2g3361 1212 SMART PGNneu 1141 1195 - -
Psa2g3361 1212 ProSiteProfiles KEN domain profile. 1079 1210 IPR010513 GO:0004540|GO:0006397
Psa2g3361 1212 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 348 1208 - -
Psa2g3361 1212 SMART ire1_9 357 388 IPR018391 -
Psa2g3361 1212 SMART ire1_9 438 470 IPR018391 -
Psa2g3361 1212 SMART serkin_6 790 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3361 1212 MobiDBLite consensus disorder prediction 721 746 - -
Psa2g3361 1212 ProSitePatterns Serine/Threonine protein kinases active-site signature. 938 950 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3361 Psa-Chr2 378426216 378445467 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3361 814 1075 MAP Kinase Kinase Kinase AT3G06030 27.444 2.49e-22 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Psa2g3361 Pkinase 3.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3361 K08852 - gmx:102661527 1107.05