Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3355 ATGGCGGCCATTGAAGGAAGAATCCCCGCGGGCATTGAAGGAAGAATCCCCGCGGCGATTGAAGGAAGAATCCCCGAGGATTTAAAGCCAAGGTATTATGCCCTTTGCACCATTGGAGGAATGCTCAGTGCTGGTACCACTCACCTTGCCACCACTCCTCTTGATGTTGTGAAAGTTAACATGCAGGTGCACCCAATTAAGTATCATAGTATTTCGTCGTGCTTTACTACCTTATTGAGGGAACAAGGGCCTTCTGTCCTCTGGAAAGGTTGGACAGGAAAGTTCTTTGGATACGGTGCTCAAGGAGGGTGTAGATTCGGTCTCTATGAATATTTCAAGGGGGTTTACTCGAATGTATTAGTAGACCAGCACAGGAGTCTTGTGTTCTTTCTTAGTAGTGCATCTGCTGAAGTATTTGCCAATTTAGCCTTATGTCCATTTGAAGCTGTTAAAGTCAGGGTTCAAGCACATCCTAGTTTTGCTAAGGGCATGTTAGACGGATTTCCGAAGGTATATGCATCAGAAGGCGCACGAGGATTCTACCGTGGACTTGTTCCACTTTTGGGTCGAAACATTCCATTTTCCATGGTTATGTTCTCAACGTTCGAGCATTCTGTTGATTTTTTGTATCGTAATGTTGTCAAGAGAAAAAAGGAGGAATGTTCAAAAGCTCAACAACTCGGTGTGACATGTTTAGCTGGATATACCGCAGGATCTGTTGGTAGCTTTGTTTCTAATCCTGCTGACAATATTGTAGCTTCTCTTTATAACAGAAAAGCTGATAGTCTTATGCTGGCTATCAGAAAAATTGGACTAGCCAATTTATTTACCAGGAGCCTTCCTATTAGAATGTTGCTGGTTGGTCCTTCCATAACTATGCAATGGTTTTTCTACGACACATTCAAAGTTTTAGGTGGACTGCCAACTAGTGGTGAAGTTGCAGCTGGCTTAGGAGATTGA 960 0.4333 MAAIEGRIPAGIEGRIPAAIEGRIPEDLKPRYYALCTIGGMLSAGTTHLATTPLDVVKVNMQVHPIKYHSISSCFTTLLREQGPSVLWKGWTGKFFGYGAQGGCRFGLYEYFKGVYSNVLVDQHRSLVFFLSSASAEVFANLALCPFEAVKVRVQAHPSFAKGMLDGFPKVYASEGARGFYRGLVPLLGRNIPFSMVMFSTFEHSVDFLYRNVVKRKKEECSKAQQLGVTCLAGYTAGSVGSFVSNPADNIVASLYNRKADSLMLAIRKIGLANLFTRSLPIRMLLVGPSITMQWFFYDTFKVLGGLPTSGEVAAGLGD* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3355 319 PANTHER PHOSPHATE CARRIER PROTEIN 21 315 - -
Psa2g3355 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 31 115 IPR018108 -
Psa2g3355 319 SUPERFAMILY Mitochondrial carrier 32 300 IPR023395 -
Psa2g3355 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 304 IPR018108 -
Psa2g3355 319 Gene3D Mitochondrial carrier domain 35 304 IPR023395 -
Psa2g3355 319 Pfam Mitochondrial carrier protein 130 212 IPR018108 -
Psa2g3355 319 Pfam Mitochondrial carrier protein 36 117 IPR018108 -
Psa2g3355 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 208 IPR018108 -
Psa2g3355 319 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 21 315 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3355 Psa-Chr2 378178943 378185543 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3355 20 313 Chloroplast and Mitochondria Gene Families AT2G17270 65.763 1.48e-153 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3355 K15102 - gmx:100788561 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3355 2 378178943 378185543 Psa2g3355 2 378178943 378185543 ECH