Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3351 ATGTGTTGGATCAAGTTGTGTAAAAGGAGGTGTAGCAATGTGTTTTACACATCTTTGAGTTTATTTGCTTTGGGTACTTTTAAAGAGCTTCTTCGCTCACAGGAATCTCGTCGTCGTTTTGACAAATCTGTGCAATCGTATGATCAGTCACGAGAAAAGTTTGTTTCTTTGAAGAAGAATACTCCTGAAGATATTGTTGCTGAATTAGAAGAGGGTCTACAAAATTCAAAGTCATCATTTGAGAAAAGCCGCTTCAATCTAGTACACTCTCTTATGAATATTGAAGTGAAAAAGAAGTACGAGTTCTTGGAGTCAATAAGTGCAATAATGGATGCTCATCTAAGACACTTTAAACTGGGTTATGACTTATTGAGCCAAATGGAGCCTTATATTCACCAGGTGCTAACGTATGCTCAACAGTCTAAAGAAGTGGCTAATATTGAGCAAGATAAGCTTGCAAAACGGATCCAGGAATACAGGACACAGACAGAGGTTGAAAATATACCCATGCCAGGTGCTGATGGCACCCATCCTGTAGGTTTGAATTCTTACAAAAGCTCTGAAGCAGGGATGCAGTTTGCAACCAAAGGCGAGATTCAAACAGTTAAACAAGGCTATCTGTTAAAACGATCATCAAGGATGCGGGGAGATTGGAAAAGGAGGGTTGGGCCTGGATCTGTCTTGCATGGTCCATTGGAGAATGCAACAACTGATGATGTTACTCCAAGACTTCATTGTGACAACAAAGAATGCCCGTGTTGTTCCAGTTATTTATGCCATTTGGTCAACTGCCGAGTTACGCTTGAGAGGTCCTCAAACAATTATGATTACCTTGTAGACGAGGGTACCAAGTGTAATGCTACATCAGACTTACTATTGGAACACAATTGTGAGCTGAGCATAGTTAATCTCTTGGTTCCTTCACTTGTGCTACTGATTACATTTCTGCAGAAATTACAGGAAGCAAAGGAGCAACACCAAAATACAAAATTAATGAATGCTCTTTTAAGAATACACAAGGAAATAAGCCCCAAGCTAGCTGCATGTGCTGCAGAGTTATCATCTTCGTATCCTGATTACACGATAGGTTATGGAGTCGCTTGTCATTTGATTGCATCTTTCTTTGTCTTTTGGTCGGTATATGGCTGGAGTCCAGGTCTTTATCACAATCTTCTTGCCAGCGTACAGGCATATAAGGATGACAGCCATGGAAAGGATGGCAGGCATGGATATCTTTGCAGTGATAGGACTGGAACTCTAACTGTTGACAAAAATCTTGTTGAGGTTTTTGCAAAAGGAGTGGATGCTGAAACCGTTGTTTTGATGACGACTCGAGCTTCAAGACTGGAGAATCAAGATGCAATAGACACCGCCATAGTTGTGACGCTAGCTGATCCAAAGGAGGCACGTGCTGGTGTACAAGAAGTGCACTTTCTTCCATTAAATCCTACCAATAAGCAGACATCAGTGACTTATACTGATCAAGAGGTTGAAATGTTTAGAGTGAGCAAAGGTGCAGCAGAACAGACCCCAAATCTGGCGCACAATGAGATCGACGTTGAGCGTAAGAGTTCGAAGCCAGAGCTATCCTGCATAAATGAAGAAAATACAAGCTTGAATGATAAGATATTGGGACTTCCAAAAGAAATAGAGTGA 1656 0.4106 MCWIKLCKRRCSNVFYTSLSLFALGTFKELLRSQESRRRFDKSVQSYDQSREKFVSLKKNTPEDIVAELEEGLQNSKSSFEKSRFNLVHSLMNIEVKKKYEFLESISAIMDAHLRHFKLGYDLLSQMEPYIHQVLTYAQQSKEVANIEQDKLAKRIQEYRTQTEVENIPMPGADGTHPVGLNSYKSSEAGMQFATKGEIQTVKQGYLLKRSSRMRGDWKRRVGPGSVLHGPLENATTDDVTPRLHCDNKECPCCSSYLCHLVNCRVTLERSSNNYDYLVDEGTKCNATSDLLLEHNCELSIVNLLVPSLVLLITFLQKLQEAKEQHQNTKLMNALLRIHKEISPKLAACAAELSSSYPDYTIGYGVACHLIASFFVFWSVYGWSPGLYHNLLASVQAYKDDSHGKDGRHGYLCSDRTGTLTVDKNLVEVFAKGVDAETVVLMTTRASRLENQDAIDTAIVVTLADPKEARAGVQEVHFLPLNPTNKQTSVTYTDQEVEMFRVSKGAAEQTPNLAHNEIDVERKSSKPELSCINEENTSLNDKILGLPKEIE* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3351 551 Coils Coil 142 162 - -
Psa2g3351 551 Gene3D Arfaptin homology (AH) domain/BAR domain 4 166 IPR027267 -
Psa2g3351 551 PANTHER CENTAURIN/ARF 29 221 IPR045258 GO:0005096
Psa2g3351 551 Pfam BAR domain of APPL family 29 143 - -
Psa2g3351 551 SUPERFAMILY BAR/IMD domain-like 11 221 IPR027267 -
Psa2g3351 551 Gene3D - 425 524 IPR023299 GO:0000166
Psa2g3351 551 Gene3D - 411 424 IPR023214 -
Psa2g3351 551 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD2 29 221 - -
Psa2g3351 551 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 442 513 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3351 Psa-Chr2 377960947 377963686 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3351 412 523 Primary Pumps ATPases AT5G62670 70.085 7.91e-45 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3351 K12489 - gmx:100796740 322.783