Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3339 ATGCTTCCTATTCAATGTCGCCACCACCACACGGCTTACCTCACCGCCCTCGTCAGCATTCTTCTCCTCTTCCCGTCAGTAACCTCCCAAGCTCAAATCCTCAAACGAGAATTTCACTCTTACGGACCCTTCAACAACACCAACCAACACCTTTTCAAAACTTTATCCTCCGCAACCATCCACCTCAACGCCATCCAGGTCACGCCGGACAGCGCCGGAAGTTCGTCTATCGTCTCCATGTATAACAACTCCGGCAGAATATTTTTCCAAGACTCCTTTAAACTCTGGGGGGACTCCTCCACCACCGGGAAACTTGTTTCCTTCAATACATCTTTCCTCTTCAACGTCTTCCCCTACCGCAACGAAACTCCCGGTGAAGGTCTCGCTTTCCTCATCGCACCTTCTCTCTCGATCCCTCTCAACAGCTCCGGCGGTTATCTCGGTTTAACAAACGCCTCCACCGACGGTAATTCCACCAACCGTTTCGTTGCCGTTGAACTTGACACCGTTAAACAAGACTTCGACAGTAACAACAACCATATGGGACTTGACATAAACAGTGTTCATTCAAAGGTTACAGTTCCACTCGATTTTGAAATCGCTCCAAACGACACTCGGTTTTATGTTTTATGGGTTGAATACGACGGTGACCGGAAAAATATTAAAGTATACATGGCGACGCAACCTTCACATGATAAACCTATAGTGGAAAAGCCGGATAAACCGGTTTTAACTTCGGGTCTTGATCTAAAAAAGGTTCTGAATCAGGACTCTTATTTTGGGTTTTCTGCTTCAACAGGAAACTTTGCTGAATTAAACTGTGTACTAAGATGGAACATTTCAATTGAAGTTTTTGATGAAAATAACCCCAAATATTTAAGGATTGGTTTAGGTGTTGGTGTTCCTGTTTTGCTTTTACTTGGTGGTGGATTTTGGTATTATTATTTGTGTAAGAAAAAGAAAAGTGATGAATATGGTTCAAATATTCAGATAAGGGGAGCATTGATGAGTTTACCAGGAACACCAAGAGAGTTTAGTTATCAGGAACTGAATAAAGCTACGAGTAATTTTGATGAAAAGAATAAACTTGGACAAGGTGGATACGGTGTCGTTTATAGAGGAACATTACCTAAGGAGAATTTGGAGGTTGCTGTTAAGATGTTTTCTAGAGATAAAATGAAAAGTACTGATGATTTCTTGGCTGAACTTACTATCATCAATCGTCTTCGCCATAAACATCTTGTTAAATTACAAGGATGGTGCCACAAAAATGGACTATTACTCTTGGTTTACGATTACATGCCGAAAGGAAGTTTAGACAGTCACATATTTTGTGAAGAAGGAACAAGCACAAACCCGCTAAGTTGGCACCTCAGGTACAAAATCCTCTCTGGTGTCGCTTCTGCATTGAATTACCTTCACAACGAATACGATCAGACAGTAGTCCACCGAGACCTCAAAGCAAACAACATAATGCTAGACTCGGACTACAATGCGCGGTTAGGCGATTTCGGCTTAGCACGTGCACTCGAAAATGAAAAAACATCCTACGCAGAACTAGAAGGTGTACAAGGTACAATGGGATACATAGCACCAGAGTGTTTCCACACAGGAAAAGCAACAAGAGAATCAGATGTTTACGGATTCGGTGCAGTGTTACTTGAAACTGTGTGTGGCCAAAGACCTTCCAGGACTAAAATAGAAGGCTATCAGTTTCTGGTTGATTGGGTTTGGTATTTGCATCGCGAAGGAAGAATATTGGATGCGGTTGATCAAAGCATTGGTAGTGATTATGATGCTGAAGAGGCAGAGAGGATATTGAAACTGGGATTGATTTGTTCTCATCCTATTGCTGGTGAGAGACCAAATTTGCAAACAATTGTTCAGATTTTATCTGGATCAGTGAATGTGCCTCACGTGCCACCTTTTAAACCGTCTTTTGTGTGGCCAGCTGTGGATTTATTTAGTTTTGCAAGTACTGATTTTACAAAAACAGATACTTGTGAGTATACACCAATCGATGGTAGGTAA 2031 0.4195 MLPIQCRHHHTAYLTALVSILLLFPSVTSQAQILKREFHSYGPFNNTNQHLFKTLSSATIHLNAIQVTPDSAGSSSIVSMYNNSGRIFFQDSFKLWGDSSTTGKLVSFNTSFLFNVFPYRNETPGEGLAFLIAPSLSIPLNSSGGYLGLTNASTDGNSTNRFVAVELDTVKQDFDSNNNHMGLDINSVHSKVTVPLDFEIAPNDTRFYVLWVEYDGDRKNIKVYMATQPSHDKPIVEKPDKPVLTSGLDLKKVLNQDSYFGFSASTGNFAELNCVLRWNISIEVFDENNPKYLRIGLGVGVPVLLLLGGGFWYYYLCKKKKSDEYGSNIQIRGALMSLPGTPREFSYQELNKATSNFDEKNKLGQGGYGVVYRGTLPKENLEVAVKMFSRDKMKSTDDFLAELTIINRLRHKHLVKLQGWCHKNGLLLLVYDYMPKGSLDSHIFCEEGTSTNPLSWHLRYKILSGVASALNYLHNEYDQTVVHRDLKANNIMLDSDYNARLGDFGLARALENEKTSYAELEGVQGTMGYIAPECFHTGKATRESDVYGFGAVLLETVCGQRPSRTKIEGYQFLVDWVWYLHREGRILDAVDQSIGSDYDAEEAERILKLGLICSHPIAGERPNLQTIVQILSGSVNVPHVPPFKPSFVWPAVDLFSFASTDFTKTDTCEYTPIDGR* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3339 676 Gene3D Transferase(Phosphotransferase) domain 1 434 638 - -
Psa2g3339 676 SMART serkin_6 357 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3339 676 ProSitePatterns Legume lectins beta-chain signature. 163 169 IPR019825 -
Psa2g3339 676 SUPERFAMILY Concanavalin A-like lectins/glucanases 44 285 IPR013320 -
Psa2g3339 676 Gene3D - 38 293 - -
Psa2g3339 676 PANTHER - 17 651 - -
Psa2g3339 676 CDD STKc_IRAK 363 631 - -
Psa2g3339 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Psa2g3339 676 ProSitePatterns Protein kinases ATP-binding region signature. 363 386 IPR017441 GO:0005524
Psa2g3339 676 Gene3D Phosphorylase Kinase; domain 1 342 433 - -
Psa2g3339 676 ProSiteProfiles Protein kinase domain profile. 357 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3339 676 SUPERFAMILY Protein kinase-like (PK-like) 340 652 IPR011009 -
Psa2g3339 676 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 17 651 - -
Psa2g3339 676 Pfam Protein kinase domain 358 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3339 676 CDD lectin_legume_LecRK_Arcelin_ConA 40 279 IPR001220 GO:0030246
Psa2g3339 676 Pfam Legume lectin domain 40 284 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3339 Psa-Chr2 375785942 375789021 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3339 83 647 Receptor kinase-like Gene Family AT5G55830 38.651 1.25e-124 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa2g3339 Pkinase 9.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3339 - - gmx:100784558 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3339 2 375785942 375789021 Psa2g3339 2 375785942 375789021 ECH