Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3338 ATGCTTCTGATTCAGTGTCGCCGCCGTCACCACCACCACCACCACCACACGGCTTACCTCACCGCCCTCATCGGCATTCTTCTCCTCTTCCCGTCAGTAACCTCCCAAGCTCAAATCCTCAAACGAAAATTTTACTCTTACGGACCTTTCAATGCCAGCAACGAACACCTTTTCGAAACTTTATCCTCCGCAACCATCCACCTCGACGCCTTCCAGGTCACGCCGGACAGCGCCGGAAGTACAACGATTGTCTCCATGTTTAACAACTTCGGCAGAGTCTTTTTCAAAGAACCCTTCAAACTCTGGGAAGATTCCTCCACCACCGGAAAACTCGTTTCCTTCAACACCTCTTTCCTCATCAACATGTTACCTTACATGAACGGAACTCCCGGTGAAGGTCTCGCTTTCCTCATCGCACCTTCTCTCTCCTTCCCTCTTAACAGCTCCGGCGGTTATCTCGGTTTAACAAACGCCTCCACCGACGGTAATTCCACCAACCATTTCGTCGCCGTTGAACTTGACACCGTTAAACAAGACTTCGACCCTGATAACAACCACATGGGACTTGACATAAACAGCGTTCGCTCCAACGTTACAGTTCCTCTCGATTTCGAAATCGCTCCGAAAATTGCTAAGATATACGCTTTATGGGTTGAATACGACGGTGACCGGAAAAACATTGATGTCTACATGGCGGAACAACCTTCGAAAGATGCACCTATAGTGGAAAAACCGGTTAGACCCGTTTTAACTTCGGGTCTTGATCTAAAACAGGTTCTGAATCAGAACTCTTATTTTGGGTTTTCCGCTTCAACGGGAAACTTTGCTGAACTAAACTGTGTACTTAGATGGAACATTTCAATTGAGGTTTTTGATGAAAAAAACGATAAAGCGTTAAGGATTGGTTTAGGTGTTGGTGTTCCTGTTTTGGTTTTGATTTTACTTGGTGGTGGATTTTGGTATTATTATATGAGTAAGAAAAAGAAAAATGATGAAAACGGTTCAAATTCTCAGATAATGGGAACATTGAAGAGTTTACCAGGAACACCAAGAGAGTTTAGTTATCAGGAACTGAAGAAAGCTACGAATAACTTTGATGGGAAGAATAAACTTGGACAAGGTGGATACGGTGTCGTTTATAGAGGAACATTGCCTAAGGAGAATTTGGAGGTTGCTGTTAAGATGTTTTCTAGAGATAAAATGAAAAGTACTGATGATTTCTTGGCTGAACTAACTATCATCAACCGTCTTCGTCATAAACATCTTGTTAGATTACAAGGATGGTGCCACAAAAATGGAGTATTACTCTTAGTTTACGACTACATGCCGAAAGGAAGTTTAGACAGTCACATATTTTGCGAAGAAGGAACAAGCACAACCCCGCTAAGTTGGCACCTTAGGTACAAAATCCTCTCTGGTGTCGCTTCTGCATTGAATTATCTTCACAACGAATACGATCAGACAGTAGTCCACCGAGACCTCAAAGCCAGCAACATAATGCTGGACTCAGACTACAACGCGCGTTTAGGCGATTTCGGCTTAGCTCGTGCACTCGAAAACGAAAAAACATCCTATGCAGAACTAGAAGGTGTACAAGGAACAATGGGATACATAGCACCAGAGTGTTTCCACACAGGAAAAGCAACAAGAGAATCAGATGTTTACGGATTCGGTGCAGTGTTACTTGAAACTGTGTGTGGCCAAAGACCTTCCTGGACTAAAATCGAAGGCTATCAGTTTCTGGTTGATTGGGTTTGGCATTTGCATCGCGAAGGACGAATATTGGAAGCGGTTGATCAAAGCGTTGGTAGTGATTATGATGCTGAAGAGGCAGAGAGGATATTGAAACTGGGATTGATTTGTTCTCATCCTATTGCTGGTGAGAGACCAAATTTGCAAACAATTGTTCAGATTTTATCTGGATCAGTGAATGTGCCTCACGTGCCACCTTTTAAACCGTCTTTTATGTGGCCAGCTGTGGATTTATCTAGTCTTGCAAGTACTGATTTTACAACAACAAATACTAGTGAGTATACACCAATCAATGGTGACTCATCTTCTATGCATGTTCGATTCTCAGATAACAACTCTCTGGTGTAA 2100 0.4305 MLLIQCRRRHHHHHHHTAYLTALIGILLLFPSVTSQAQILKRKFYSYGPFNASNEHLFETLSSATIHLDAFQVTPDSAGSTTIVSMFNNFGRVFFKEPFKLWEDSSTTGKLVSFNTSFLINMLPYMNGTPGEGLAFLIAPSLSFPLNSSGGYLGLTNASTDGNSTNHFVAVELDTVKQDFDPDNNHMGLDINSVRSNVTVPLDFEIAPKIAKIYALWVEYDGDRKNIDVYMAEQPSKDAPIVEKPVRPVLTSGLDLKQVLNQNSYFGFSASTGNFAELNCVLRWNISIEVFDEKNDKALRIGLGVGVPVLVLILLGGGFWYYYMSKKKKNDENGSNSQIMGTLKSLPGTPREFSYQELKKATNNFDGKNKLGQGGYGVVYRGTLPKENLEVAVKMFSRDKMKSTDDFLAELTIINRLRHKHLVRLQGWCHKNGVLLLVYDYMPKGSLDSHIFCEEGTSTTPLSWHLRYKILSGVASALNYLHNEYDQTVVHRDLKASNIMLDSDYNARLGDFGLARALENEKTSYAELEGVQGTMGYIAPECFHTGKATRESDVYGFGAVLLETVCGQRPSWTKIEGYQFLVDWVWHLHREGRILEAVDQSVGSDYDAEEAERILKLGLICSHPIAGERPNLQTIVQILSGSVNVPHVPPFKPSFMWPAVDLSSLASTDFTTTNTSEYTPINGDSSSMHVRFSDNNSLV* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3338 699 ProSitePatterns Legume lectins beta-chain signature. 169 175 IPR019825 -
Psa2g3338 699 Gene3D Transferase(Phosphotransferase) domain 1 442 646 - -
Psa2g3338 699 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 23 666 - -
Psa2g3338 699 PANTHER - 23 666 - -
Psa2g3338 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Psa2g3338 699 ProSitePatterns Protein kinases ATP-binding region signature. 371 394 IPR017441 GO:0005524
Psa2g3338 699 SUPERFAMILY Concanavalin A-like lectins/glucanases 45 291 IPR013320 -
Psa2g3338 699 ProSiteProfiles Protein kinase domain profile. 365 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3338 699 SUPERFAMILY Protein kinase-like (PK-like) 347 673 IPR011009 -
Psa2g3338 699 Pfam Legume lectin domain 45 295 IPR001220 GO:0030246
Psa2g3338 699 Pfam Protein kinase domain 368 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3338 699 Gene3D Phosphorylase Kinase; domain 1 350 441 - -
Psa2g3338 699 CDD STKc_IRAK 371 639 - -
Psa2g3338 699 SMART serkin_6 365 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3338 699 Gene3D - 43 302 - -
Psa2g3338 699 CDD lectin_legume_LecRK_Arcelin_ConA 45 285 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3338 Psa-Chr2 375781339 375785421 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3338 91 669 Receptor kinase-like Gene Family AT5G55830 37.662 1.16e-124 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa2g3338 Pkinase 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3338 - - gmx:100780014 996.497