Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3335 ATGATCTTTGATACCCCTCCGTCCGGCGCCCAAAGTGTGAGAACAAACAGATTTTCATTTGGTTCTAGCATTGCCAATGAGGGTACTCCTCTACACAGCTATGGTTCTATTACAAATGGCGATGGCTATGACAGTGATGGCTCCAATTTCGCACCACCCACACCATCAACTCTACCTATGGCTATTCCAGCAGAACTCGCTGGAGCTGCACCCTTGATTGAAAGATTCCAGGTGGAAGTTTTTTTAAAATTGATGCAAAAACAAATTCAATCTGCGGGGAAGCGGGGATTTTTTTCTAAGCGATCCGTGGGCCCCCAAGTTCGAGAGAAACTTACAATTGAAGACATGCTTTGCTTCCAAAAGGATCCGATACCAACCTCATTGCTTAAGCTGAATGGCGATTTGGCAAGCAGGGCAATAAAGTTGTTCCAGATGGTTTTGAAATATATGGGCATTGATTCGTCTTCACTAAGCGTAGAGGATCGGGTTGAGCTTGTAGGTAAACTATACAAGCAAAGTTTGAAGCGCTCTGAACTCCGAGACGAACTTTTTATCCAGATATCAAAACAAACAAGAAACAATCCAGAGAGGGAATGCTTGATCAAAGCGTGGCAGCTAATGTATTTATGCGCGTCGTGCATGCCTCCTAGCAAAGACATTGGAGGATATCTGTCAGAATATATTCACAATGTAGCGTATGGTGCGACAGTTGATCCTATGATCCAAGGCCTTGCATTGAATTCCTTAAATGCTTTGAAGCACTCTCTTAAGGCTGGTCCTAGGCATATAATACCCGGGCCTGCAGAGATTGAAGCTCGGATAACCGGGAAAAAGCTCACAAATATAGTCTTCTTTCTGGATGAAACATTTGAGGAAATTACATATGACATGTCAACAACCGTTGCAGACGCTGTTGAGGAACTTGCAGGGATCATTAAACTGTCAACATACTCTAGCTTTGGCTTGTATGAGTGCCGCAGAGTTGTCACAAGCTCAAAATCATCTGATTCTGGGAATGAGGAGTACATTGGGTTGGACGATAATAAACACGTCGGCGATCTACTGGCTGAATTTAAGGCAGTAAAAGATCGAAACAAGGGAGAAACTTTGCACTGCAAACTAGTATTCAAGAAAAAGTTATTTCGTGAATCGGATGAAGCCGTGATAGATCCTATGTTTTGGCAGCTGTCTTATGTACAGTTGCAGCATGATTATATTTTGGGTAATTATCCTATTGGAAGAGACGATGCATCAAAGCTTTCTGCATTGCAAATCTTGGCTGAGATTGGATTTGTTAGAAGACCTGAATCATGCGCTGATTGGAATTCATTTCTCGAGCGGTTTCTTCCCAGGCAAATTGCAATGACTCGAGCAAGACGCGAATGGGAGTTGGACATTCTTGCTTGCTATCACTCACTGGAGCATGTCATGAAAGAAGATGCAAGACAACAATTTTTGCATATAATAAGAACACTTCCTTATGGTTTTTCTGTTTTTTTCAATGTTCGCAAAATTGACGATCCTATTGGACTCCTTCCCGGACGAATAATATTAGCAATTAACAAGAGAGGGGTTCATTTTTTTCGTCCCATTCCGAAGGAATATTTGCACTCAGCTGAATTGAGAGACATAATGCAATTTGGAAGTAGTAATACTGCTGTATTTTTTAAAATGCGAGTTGCCGGCGTTCTTCACATATTCCAGTTTGAAACCAAGCAGGGAGAAGAAATTTGTGTAGCTCTTCAAACACACATAAACGATGTAATGCTGCGCCGATATTCCAAGACACGATCTTCTCCTACTGGTTCATTAGATAAAGAGATTTCCAGTGATTTCAAGCCTCAAAATCTGGAATTGAATGAGAAACGTGTTCAAGAATTAACAGAAGCTGTTGAAGATTCTCAAAGAAAAGCTGATCAATTGCAGGAAAAATTGCACGAGAAGCAAAAACAAGTAGACGAGGTGCTCCAAGAACTAGAATGCTCGAAAGAATCTTTAACAACTTTGGAGCATAGTCTTGCAGAAGTGACAAATGACCGTGATAGGCTTTTATCTCTATGCGATGAAAAAGATAAAGAACTTCAGGATAAAATTCTAGAGAAAAGGAGTTTGGAAGCAAAGATGGCCAAGTTGAATAGTTTGATGATAGATGAAGTTTCCAATAAGGATCCTATCGGAGCAAATGACCCGGCATTGCGAAAGCTTGAAGATGACTTGAAACATTGTAGAGAGGAGTGTATAGAAGCTGAAGAGACAATCAAAAGCTTGACAAATGAGAAGTTGATTTTGACACATAAGCTATCTGAGCTTGAGAAAAGGAATGCGAAAGAGATTAGTACTATTCAACGAAAATTTGATCAAGAACGCAAAACTCAAAACTCTCAAGTGCAAGATCTAGAAAGAAAACTCGATGTGCTTAGACAAGAACTGGTTGCGGCTGAATCTACACTTTCGGCGAAGGACTCTGAATTGGCTGCTTTGAAGAACAATTTAAAAGAATTAGAAGATTTGAGAGAAATGAAAGAGGACATTGACAGAAAGAATGAACAAACAGCCTCCATATTGAGAATGCAAGGGGCTCAACTAGCCGAAATGGAATCGCTTTATAAAGAAGAACAGGTTCTCAGAAAGCGATATTTCAATACCATAGAAGACATGAAAGGAAAAATAAGAGTTTACTGTCGACTAAGACCTCTCTCTGAAAGAGAGATTGCCGAGAAAGAAAGAGATGCACTTTCTGCTGTAGACGAGTTTACTATTGAACATCCATGGAAAGATGATAAAGCAAAACAACACATATACGACCGTGTGTTTAATTGTGACGCATCTCAGGAAGATGTTTTTGAGGATACAAGGTACTTGGTGCAATCTGCTGTAGATGGTTATAATGTTTGTGTATTTGCTTATGGCCAAACTGGCTCTGGAAAGACCTTTACAATCTACGGATCCGAAAATAATTCTGGCCTTACACCACGCGCCACTGCAGAGCTTTTTAAAATTTTAAGAAGGGATGGTAACAAGTTTTCTTTTTCCTTGAAGGCGTATATGTTGGAATTATATCAAGATACACTTGTAGATCTCTTGTTACCTAAGAATGCAAAGCGATTAAAATTGGAGATTAAGAAGGATTCAAAGGGAATGGTAACGGTAGAAAACGTAACGACCGTGTCAATTTCTACCGTGGATGAGTTGAATAGCATAATACAAAAGGGTTCTGAACGACGACATACCTCAGGGACACAAATGAATGAAGAAAGTTCAAGATCTCATCTTATATTATCAGTAGTAATTGAAAGTGTCAACCTTCAAAGTCAATCATCTGCAAGAGGAAAGTTGAGTTTTGTGGATCTTGCTGGCTCGGAACGAATTAAAAAGTCAGGATCTGAGGGTAGTCAACTGAAAGAAGCTCAAAGTATAAACAAATCATTATCAGCACTTGGTGATGTTATTAGTGCTTTATCTTCTGGTGGACAACACATACCTTATAGAAATCACAAGTTAACTATGTTGATGAGTGATTCACTTGGAGGCAATGCCAAAACTCTCATGTTTGTCAATGTATCTCCAATAGAATCAAGCTTGGATGAGACACATAACTCTCTCATATATGCGTCGCGAGTGAGGTCTATTGTGAATGATCCAAGTAAAAATATTTCGTCGAAAGAGATAGCTCGACTGAAGAAGTTAGTGGCTTATTGGAAGGAGCAAGCAGGTAGGAGAGGGGAGGATGAAGATTTAGAAGAAATTCAAGATAAACGGCCGACTAAAGAGAGGAACGACGGCCATGGCCATGGCCATGGACGCCATACTATGTAA 3816 0.4007 MIFDTPPSGAQSVRTNRFSFGSSIANEGTPLHSYGSITNGDGYDSDGSNFAPPTPSTLPMAIPAELAGAAPLIERFQVEVFLKLMQKQIQSAGKRGFFSKRSVGPQVREKLTIEDMLCFQKDPIPTSLLKLNGDLASRAIKLFQMVLKYMGIDSSSLSVEDRVELVGKLYKQSLKRSELRDELFIQISKQTRNNPERECLIKAWQLMYLCASCMPPSKDIGGYLSEYIHNVAYGATVDPMIQGLALNSLNALKHSLKAGPRHIIPGPAEIEARITGKKLTNIVFFLDETFEEITYDMSTTVADAVEELAGIIKLSTYSSFGLYECRRVVTSSKSSDSGNEEYIGLDDNKHVGDLLAEFKAVKDRNKGETLHCKLVFKKKLFRESDEAVIDPMFWQLSYVQLQHDYILGNYPIGRDDASKLSALQILAEIGFVRRPESCADWNSFLERFLPRQIAMTRARREWELDILACYHSLEHVMKEDARQQFLHIIRTLPYGFSVFFNVRKIDDPIGLLPGRIILAINKRGVHFFRPIPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKTRSSPTGSLDKEISSDFKPQNLELNEKRVQELTEAVEDSQRKADQLQEKLHEKQKQVDEVLQELECSKESLTTLEHSLAEVTNDRDRLLSLCDEKDKELQDKILEKRSLEAKMAKLNSLMIDEVSNKDPIGANDPALRKLEDDLKHCREECIEAEETIKSLTNEKLILTHKLSELEKRNAKEISTIQRKFDQERKTQNSQVQDLERKLDVLRQELVAAESTLSAKDSELAALKNNLKELEDLREMKEDIDRKNEQTASILRMQGAQLAEMESLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLSEREIAEKERDALSAVDEFTIEHPWKDDKAKQHIYDRVFNCDASQEDVFEDTRYLVQSAVDGYNVCVFAYGQTGSGKTFTIYGSENNSGLTPRATAELFKILRRDGNKFSFSLKAYMLELYQDTLVDLLLPKNAKRLKLEIKKDSKGMVTVENVTTVSISTVDELNSIIQKGSERRHTSGTQMNEESSRSHLILSVVIESVNLQSQSSARGKLSFVDLAGSERIKKSGSEGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPIESSLDETHNSLIYASRVRSIVNDPSKNISSKEIARLKKLVAYWKEQAGRRGEDEDLEEIQDKRPTKERNDGHGHGHGRHTM* 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3335 1271 CDD KISc_C_terminal 887 1212 - -
Psa2g3335 1271 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 611 1260 - -
Psa2g3335 1271 Gene3D - 1213 1261 - -
Psa2g3335 1271 ProSitePatterns Kinesin motor domain signature. 1110 1121 IPR019821 GO:0003777|GO:0005524|GO:0007018
Psa2g3335 1271 SUPERFAMILY PH domain-like 499 587 - -
Psa2g3335 1271 Gene3D - 497 604 IPR011993 -
Psa2g3335 1271 Gene3D - 278 382 - -
Psa2g3335 1271 PRINTS Kinesin heavy chain signature 961 982 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g3335 1271 PRINTS Kinesin heavy chain signature 1080 1097 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g3335 1271 PRINTS Kinesin heavy chain signature 1111 1129 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g3335 1271 PRINTS Kinesin heavy chain signature 1160 1181 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g3335 1271 SUPERFAMILY Prismane protein-like 832 893 IPR011254 GO:0003824|GO:0016491
Psa2g3335 1271 Gene3D - 391 492 IPR014352 -
Psa2g3335 1271 Pfam FERM central domain 387 499 IPR019748 -
Psa2g3335 1271 SMART B41_5 275 499 IPR019749 -
Psa2g3335 1271 Pfam MyTH4 domain 168 272 IPR000857 GO:0005856
Psa2g3335 1271 Coils Coil 732 773 - -
Psa2g3335 1271 Coils Coil 617 665 - -
Psa2g3335 1271 ProSiteProfiles FERM domain profile. 279 593 IPR000299 GO:0005856
Psa2g3335 1271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 889 1238 IPR027417 -
Psa2g3335 1271 Gene3D MyTH4 domain 98 275 IPR038185 -
Psa2g3335 1271 Coils Coil 687 714 - -
Psa2g3335 1271 Coils Coil 782 850 - -
Psa2g3335 1271 Gene3D Kinesin motor domain 876 1212 IPR036961 -
Psa2g3335 1271 ProSiteProfiles Kinesin motor domain profile. 889 1210 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g3335 1271 SUPERFAMILY Second domain of FERM 377 494 IPR035963 -
Psa2g3335 1271 CDD FERM_B-lobe 395 492 IPR019748 -
Psa2g3335 1271 SMART MyTH4_1 119 274 IPR000857 GO:0005856
Psa2g3335 1271 MobiDBLite consensus disorder prediction 1237 1271 - -
Psa2g3335 1271 CDD FERM_C_KCBP 497 602 - -
Psa2g3335 1271 Pfam Kinesin motor domain 895 1210 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g3335 1271 ProSiteProfiles MyTH4 domain profile. 119 274 IPR000857 GO:0005856
Psa2g3335 1271 SMART kinesin_4 887 1218 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g3335 1271 PANTHER KINESIN-RELATED 611 1260 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3335 Psa-Chr2 375488184 375495764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3335 51 1260 Calmodulin-binding Proteins AT5G65930 71.358 0.0 1755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3335 - - gmx:100782701 2070.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3335 2 375488184 375495764 Psa2g3335 2 375488184 375495764 ECH