Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3332 ATGGGGGGTGACAAGTGGAAGGCCCATTTGGGCATGGCGTTTGTGCAGCTATTATATGGTGGCTACCACGTCATCACCAAAGTGGCCCTTAATGTTGGAGTCAACCAACTTGTCTTCTGCTTCTATAGGGATCTCCTTGCTCTCATCATCCTTTCTCCGATAGCTTTTTTCAAAGAAAGACAGACAAGGCCATCCATTACTAAGAAGCTATTATTGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGTAACCAGCTCTTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCAGCTGCCTTACAACCAGCTATTCCTGTCTTTACCTTTCTCTTTGCTGTTATAATGAGTGTAGAAAAAGTGAATTTGAAGAGTTTTGAAGGTCTGGCAAAGGTTGGAGGAACTCTTATCTGTGTTTCGGGCGCCGTATTGATGGTTTTGTATCGCGGTCCGTCGTTGATAGGGTATGCGGAACTGGTCATTATACCAAAGAATGAAATAAATGTTGGTGGTCTGCCAGAGCCTTCTGGATGGTTGATCAGTGGTTTAAAGGATCTTGGATTAGATAATTTTGAACTTGGAGTTGTGTTCTTGATAGGGAACTGCATGTGCATGGCTGCTTTTCTAACCATTCTGGCACCAGTATTAAAAAAGTATCCTGCAAATTTATCTGTGACAGCTTATTCATTCTTCTTTGGAGTTGTACTAATGGCAATGGTCTCGTTATTCATGACGGATCTATCAAGTGACTGGATTTTGACACAATCAGAAATACTTGCTATTGTTTATGCTGGAACTATTGCATCTGCCTTTAATTATGCAGTCATTAGTTGGTGCAACAAGATATTAGGACCAGCTTTGGTTTCCCTATACAATCCACTTCAACCTGGATTTTCTGCTCTACTGTCTCAGATATTCCTTGGAAGTCCAATTTATTTGGGAAGTCTCATAGGAGGATCTTTGATCATTGCTGGTCTTTATACTGTTACATGGGCGTCTTATAAAGAAAAACAGGCAATTGTTGAAATTACTTCTCATGAATCTTGGGTTTCTGAACCACTTATTCATGAAAAAACTGCACACCAAAGAAATCAAATATCTCGGGCGTCCTCCAGCGCATCATCAAACCCAAAATCGTATGATTAA 1155 0.3991 MGGDKWKAHLGMAFVQLLYGGYHVITKVALNVGVNQLVFCFYRDLLALIILSPIAFFKERQTRPSITKKLLLSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAALQPAIPVFTFLFAVIMSVEKVNLKSFEGLAKVGGTLICVSGAVLMVLYRGPSLIGYAELVIIPKNEINVGGLPEPSGWLISGLKDLGLDNFELGVVFLIGNCMCMAAFLTILAPVLKKYPANLSVTAYSFFFGVVLMAMVSLFMTDLSSDWILTQSEILAIVYAGTIASAFNYAVISWCNKILGPALVSLYNPLQPGFSALLSQIFLGSPIYLGSLIGGSLIIAGLYTVTWASYKEKQAIVEITSHESWVSEPLIHEKTAHQRNQISRASSSASSNPKSYD* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3332 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 338 - -
Psa2g3332 384 MobiDBLite consensus disorder prediction 363 384 - -
Psa2g3332 384 PANTHER WAT1-RELATED PROTEIN 8 375 IPR030184 GO:0016021|GO:0022857
Psa2g3332 384 Pfam EamA-like transporter family 10 133 IPR000620 GO:0016020|GO:0016021
Psa2g3332 384 Pfam EamA-like transporter family 196 333 IPR000620 GO:0016020|GO:0016021
Psa2g3332 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 151 - -
Psa2g3332 384 MobiDBLite consensus disorder prediction 367 384 - -
Psa2g3332 384 PANTHER NODULIN MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN 8 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3332 Psa-Chr2 375180084 375183658 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3332 91 361 Nodulin-like Gene Family AT5G45370 59.636 7.37e-110 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3332 - - mtr:MTR_5g025330 647.506