Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3330 ATGAATCAAAATCTGCAACGGGAATGGTCCTTCAATGACTTTGAGATCGGAAAGCCACTTGGGAAAGGGAAGTTCGGCAGAGTCTATGTCGCCAGAGAAGTCAAGGTTATATTTAAGGAACAACTTGAAAAGTATAAACTTCACCATCAACTGAGGAGAGAAGTGGAGATCCAGATCAGTCTTAAACATCCAAACATCTTGCGTCTCTATGGTTGGTTTCATGATTCCGAGCGTGTTGTCTTGATTCTTGAATATGCTCATAATGGTGAGCTATACAGGGAGCTTAGCAAAAGACATCATTTCTCAGAGAAGCAAGCTGCAACGTACATTTTAAGCCTGACAGAGGCATTGGCATATTGTCATGAGAAGCATGTTATTCACAGGGATATCAAGCCTGAAAATTTGTTGCTCGACCATGAGGGTCGTCTTAAGATTGCAGACTTTGGTTGGTCTGTACAATCTAAAATGAAAAGACAAACCATGTGTGGGACATTGGACTATTTAGCTCCTGAAATGGTAGAAAACAGAGGTCATGATTATGCTGTTGATAACTGGACTCTTGGTATCCTTTGCTATGAGTTCCTTTATGGTGCTCCTCCATTTGAGGCTGAGAGTCAAATTGATACCTTCCAAAGGATAAAAAATGTTGATTTGATCTTCCCTCCTAGCCCTATTGTTTCTTCAGATGCCAAAAACCTTATAAGACGGCTCCTGGTAAAAGATTCCTCAAGAAGGCTCTCACTCCAGAAGATAATGGAGCATCCTTGGATAATCAAGAATGCAAATTGTATCGGTGACTGCGCGTAG 807 0.4126 MNQNLQREWSFNDFEIGKPLGKGKFGRVYVAREVKVIFKEQLEKYKLHHQLRREVEIQISLKHPNILRLYGWFHDSERVVLILEYAHNGELYRELSKRHHFSEKQAATYILSLTEALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSKMKRQTMCGTLDYLAPEMVENRGHDYAVDNWTLGILCYEFLYGAPPFEAESQIDTFQRIKNVDLIFPPSPIVSSDAKNLIRRLLVKDSSRRLSLQKIMEHPWIIKNANCIGDCA* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3330 268 SUPERFAMILY Protein kinase-like (PK-like) 6 260 IPR011009 -
Psa2g3330 268 Pfam Protein kinase domain 14 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3330 268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Psa2g3330 268 SMART serkin_6 14 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3330 268 PIRSF ILK 2 261 - -
Psa2g3330 268 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 4 261 IPR030616 GO:0004672
Psa2g3330 268 CDD STKc_Aurora 13 257 - -
Psa2g3330 268 ProSiteProfiles Protein kinase domain profile. 14 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3330 268 Gene3D Transferase(Phosphotransferase) domain 1 6 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3330 Psa-Chr2 375116265 375120009 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3330 6 260 CBL-interacting serine-threonine protein kinases AT5G10930 38.148 1.23e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Psa2g3330 Pkinase 4.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3330 K08850 - gmx:100775802 467.233