Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3323 ATGAATCCACAAAATTCATCCAAATCAATCACCGCTCAGTCAAAAACCACATCACTTTTCTTTGAGTTAAAGCAAGAAAGAGAACCATCAGTTTCAGAAATCAAGCAAGAAACTTTATTCATTTCAATGGCAACACTAGTTTCAGGATCAACGGGGAGTGACGTATGGAAGGCGCATTTGGGTATGGCATTGGTGCAGCTATTCAATGGTGGCTACCATGTAATTACCAAAGTAGCCCTTAATGTTGGGGTTAACCAGTTAGTCTTTTGCCTCTACCGAGATCTACTCGCCCTCTTTATCCTTGCTCCCATCGCTTATATTCGTGAAAAACGGACACGACCACCCATTACTAAGGACATCCTGATATCATTCTTTTTCCTTGGATTAACTGGGATATTCGGCAACCAACTTCTGTTTCTTCTTGGTTTAAGCTATACAAATCCAACTTATGCTGCTGCCACACAGCCGGCCATTCCAGTCTTTACATTTTTGTTCGCTGTACTGATGGGTACAGAAAGAGTGAACTTGCTCAGATATGAAGGTCTGGCAAAGGTTCTAGGAACTATTATCTGTGTTTCGGGTGCCATATTGATGGTTTTGTTTCGCGGTCCAGCTGTAATAGGAAATACAGAAATTGCTCATTTAGCACAAAATGAAATTAGTGCGAGAGGTCAGCCTGAGCCATCTGGATGGTTTATTGGTGGCTTACAGGGTCTTGGATTCGACCATTTTCATCTTGGGGTTCTGTGCTTGATAGGGAACTGTATGTGTATGGCTGCTTATCTAGCCATTCAGGCACCGGTATTGAAAAAATATCCTTCAAACCTATCTGTCACGGCATATTCATACTTCTTTGGAGCTGTTCTGATGGTGGTGGTGTCATTTTTAGTGACTAACGAGTCAACTGAATGGAGTCTGACATCGGCTGAAATACTTGCTGTTATTTATGCTGGAACTATTGCATCTGCTCTTAACTATGGACTCATTACATGGTGCAATAAGATTTTAGGTCCAGCTTTGGTTGCCCTATACAATCCACTTCAACCCGGCTTTTCTGCCATACTGTCTCAGATATTCCTCGGAAGTCCAGTTTACTTGGGAAGCATCATAGGTGGATCGTTTATCATTGCTGGTCTATATACAGTTACTTGGGGATCATATAGAGAAAGGCTAGCAGGAGTTGGAGTTACTCCTCAAGGTCCCGGGGAAACTGAACCACTTATCCATGAAAAAACTACATATCAGATAGGTCACATTTTTTCTGGACCCTCTAGTTTATCTCCAAAGCTATCCGATTAA 1299 0.4196 MNPQNSSKSITAQSKTTSLFFELKQEREPSVSEIKQETLFISMATLVSGSTGSDVWKAHLGMALVQLFNGGYHVITKVALNVGVNQLVFCLYRDLLALFILAPIAYIREKRTRPPITKDILISFFFLGLTGIFGNQLLFLLGLSYTNPTYAAATQPAIPVFTFLFAVLMGTERVNLLRYEGLAKVLGTIICVSGAILMVLFRGPAVIGNTEIAHLAQNEISARGQPEPSGWFIGGLQGLGFDHFHLGVLCLIGNCMCMAAYLAIQAPVLKKYPSNLSVTAYSYFFGAVLMVVVSFLVTNESTEWSLTSAEILAVIYAGTIASALNYGLITWCNKILGPALVALYNPLQPGFSAILSQIFLGSPVYLGSIIGGSFIIAGLYTVTWGSYRERLAGVGVTPQGPGETEPLIHEKTTYQIGHIFSGPSSLSPKLSD* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3323 432 PANTHER WAT1-RELATED PROTEIN 55 424 IPR030184 GO:0016021|GO:0022857
Psa2g3323 432 SUPERFAMILY Multidrug resistance efflux transporter EmrE 296 388 - -
Psa2g3323 432 Pfam EamA-like transporter family 246 383 IPR000620 GO:0016020|GO:0016021
Psa2g3323 432 Pfam EamA-like transporter family 59 198 IPR000620 GO:0016020|GO:0016021
Psa2g3323 432 PANTHER WAT1-RELATED PROTEIN 55 424 - -
Psa2g3323 432 SUPERFAMILY Multidrug resistance efflux transporter EmrE 92 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3323 Psa-Chr2 374944366 374948531 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3323 141 413 Nodulin-like Gene Family AT5G45370 63.177 2.43e-122 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3323 - - gmx:100787738 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3323 2 374944366 374948531 Psa2g3323 2 374944366 374948531 ECH