Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3315 ATGTTAGGTCCATCAGGCAGTGGCAAAACAACACTCCTTACGGCTCTCGGCGGCCGTCTTGCCGGTAAACTATCAGGAAAAGTCACCTACAACAATCAATCTTTTTCCGGTTTGATAAAAAGAAGAACAGGTTTCGTTGCTCAAGACGATGTTCTTTACCCTCACCTAACCGTAACGGAAACTCTAGTGTTCACTGCACTTTTGAGGCTTCCGCAAACCTTAACAAGAGATGAAAAAGTTGAGCATGTGGAGAGAGTTATAACTGAGTTAGGACTAAGTAATTGTAGGAGTAGTATGATTGGAGGACCACTTTTGAGAGGTATATCAGGTGGTGAGAAAAGGAGAGTGAGTATAGGACAAGAAATGTTGATTAATCCGAGTTTGTTATTGCTTGATGAACCTACTTCTGGTTTGGATTCTACCACAGCGCTAAGGATCTTGAACACTATCAAAAAACTTGCTAGTGGTGGTAGAACTGTTGTTACAACAATTCATCAACCTTCTAGTAGACTCTACTATATGTTTGATAAGGTTGTGTTGCTTTCAGAAGGATGTCCTATATATTACGGTCCTGCTTCAACTGCTCTTGAATATTTCTCGTCCGTTGGTTTTTCGTCTTGCGTGACAGTTAATCCAGCTGATCTCTTGCTTGATCTTGCCAATGGGATTGGTCCGGACTCTAAGCATGTAACTGAACAAAGCGAGGCTTTGGAAATCGAGAGGAAGACTGTTCGAGAAACTCTCATTTCTGCTTATGACAAGAACTTATCTGCAAGGCTGAAAGCTGAGGTTTGTAGCATGGGAGAGAGCAACTTAGATGCTTGCACAAGAAATCAAATTAAACCAGAACAATGGTGTACAAGCTGGTGGTATCAGTTCACTGTATTATTGCAAAGAGGAGTGAAGGAAAGAAGGCATGAAGCCTTCAATAAGCTGCGAATATTTCAAGTCGTAAGTGTCGCTTTTCTTGCTGGACTCTTGTGGTGGCATACACCTAAATCACACCTTGAAGATAGGATAGCTTTGCTCTTTTTCTTTGCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCGGTTTTCACATTTCCACAAGAGAGAAGAATGCTAATCAAAGAACGGTCATCGGGAATGTACCGTCTCTCATCGTACTTTCTAGCAAGAACAATAGGAGACTTACCTCTCGAACTCGCTCTTCCAACGGCCTTTGTGGTCATATTATATTGGATGGGAGGGCTCAAACCTGATCTTATGACTTTCATTCTTTCACTTCTTGTTGTTCTTTACAGTGTTGTTGTGTCTCAAAGCCTTGGATTAGCATTTGGTGCTATTCTGATGGATATCAAACAGGCAACTACACTAGCTTCTGTGACAACACTTGTTTTTCTCATTGCTGGAGGATACTATATACAACAGATTCCACCTTTCATAGTCTGGCTTAAGTTCTTAAGCTATAGCTACTACTGTTACAAGCTTCTTCTCGGTGTTCAGTACGGCGAAAATGATTATTATCAATGTCCAAATGGCGAGACGTGTAGGGTTTTGGACTTTCCGCCGATTAAATCGATGGGATTGAATCATATGTGGGTTGATGTTTCCGTCATGGCGTTGATGTTGGTTGGTTATAGACTAGTTGCTTATTTTGCACTTCATAGAGTTAGGTAA 1662 0.4134 MLGPSGSGKTTLLTALGGRLAGKLSGKVTYNNQSFSGLIKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPQTLTRDEKVEHVERVITELGLSNCRSSMIGGPLLRGISGGEKRRVSIGQEMLINPSLLLLDEPTSGLDSTTALRILNTIKKLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYYGPASTALEYFSSVGFSSCVTVNPADLLLDLANGIGPDSKHVTEQSEALEIERKTVRETLISAYDKNLSARLKAEVCSMGESNLDACTRNQIKPEQWCTSWWYQFTVLLQRGVKERRHEAFNKLRIFQVVSVAFLAGLLWWHTPKSHLEDRIALLFFFAVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVVILYWMGGLKPDLMTFILSLLVVLYSVVVSQSLGLAFGAILMDIKQATTLASVTTLVFLIAGGYYIQQIPPFIVWLKFLSYSYYCYKLLLGVQYGENDYYQCPNGETCRVLDFPPIKSMGLNHMWVDVSVMALMLVGYRLVAYFALHRVR* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3315 553 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 2 208 IPR003439 GO:0005524
Psa2g3315 553 Pfam ABC transporter 1 136 IPR003439 GO:0005524
Psa2g3315 553 Pfam ABC-2 type transporter 291 497 IPR013525 GO:0016020|GO:0140359
Psa2g3315 553 SMART AAA_5 1 185 IPR003593 -
Psa2g3315 553 Pfam ABC-2 type transporter 165 237 IPR043926 GO:0140359
Psa2g3315 553 ProSitePatterns ABC transporters family signature. 108 122 IPR017871 GO:0005524
Psa2g3315 553 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 200 IPR027417 -
Psa2g3315 553 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 551 - -
Psa2g3315 553 Gene3D - 1 202 IPR027417 -
Psa2g3315 553 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3315 Psa-Chr2 374542911 374545712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3315 1 184 Calmodulin-binding Proteins AT2G36910 30.052 4.83e-11 63.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3315 2 374542911 374545712 Psa2g3315 2 374542911 374545712 ECH