Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3286 ATGAAGTCTTTTTCTCTCTTGCCACCTATACTTTTATACCTTCATTTGCTTTTTCTGTTTGGTCCAAACACAGTTATGGCCGTGACAGTAGAAAATCAAACAGATTATTTGGCATTGCTGAAATTCAAAGAATCAATATCCAGTGATCCATATAGAATCCTTGATTCTTGGAATTCTTCCATTCACTTCTGCAACTGGTCTGGAATCACATGCAACCCCAAGCATAAAAAATTTAATGAGATATCAGGAAAGGTTCCGGCAGAGTTAGGAAATCAAGTAAATTTAATTCTTTTAGCCATGGAAAATAACCATTTTGAAGGATTTATACCGACTAATTTTGAAAACTTGAAAAGCATTCAAGTGTTAAAATTGGATAACAACATGCTCTCAAGATCTATACCATTCTCCATAGGCAATCTCAGTCAATTGTTTTACTTGGATATGTCAAACAATATGTTAGAAGGAAATATTCCTCTAAGCTTAGGAAAATGCCAAAAGTTACAATATCTATATCTTTCACAAAACAATCTTCAAGGATCCATACCCTTAGAAGTTCTTAGAATTTCATCCTTGACAATGGGATTTGACTTATCACAAAATTCATTGAGTGGTGAGATTCCTAGAACCATCTGCAAAAACTCCTTCCAAAGAACTATACCTTCTAATTTAGCATCTCTCAAAGGTCTTCAGTATTTAGACCTATCAAGAAACCGGTTGTCTGGATCAATTCCTGATGTTATACAAAACATCTCTGGTTTAAAACACTTGAATGTTTCTTTTAACATGTTGGAAGGCGAGGTACCAATAGGTGGTGTGTTTGGAAATGTAACCCAAGTAGCAATGATTGGAAACAAAAAACTTTGTGGCGGTATTTCAGAGTTGCATCTACCACTATGTCCTATCAAGGGTAGCAAACACACAAACAAACATAATATCAAGTTGATAGCAGTGATAGCTGGTGTGGTTTCTTTTCTTCTCGTACTTTCATTTATTATAATTATCTATTGGATGAGGAAAACAAACCAAAAATCATCTTTTGATTCACCAACAAATGATCAATTAACTAAGGTTTCATACCAAGAATTACACCGAGGAACAAATGGGTTCTCAGATAGGAATTTGATCGGATCGGGAAGTTTTGGTTTTGTGTACAAAGGAAATCTTATGTCACAAGATAATGCTGTTGCAGTAAAGGTCCTGAACCTCCTAAAGAAAGAAGCACACAAGAGTTTCATTGCTGAATGTAATGCACTTAAAAGTATTAGACACCGAAATTTAGTTAAGATCTTAACATGTTGTTCTAGTACAGATTATAAAGGTCAAGAATTTAAAGCTCTAGTTTATGATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCTGAGACTTTAAATGCGGAGCTTCCAAAAACATTGGACCTCACTCTTATATTAAATATTATTATCGATGTTGCTTCAGCATTACATTATCTTCATCAAGAATGTGAGCAATTGGTCCTTCACTGTGATATAAAGCCAAGTGATGTCCTTCTTGATGATGACATGGTTGCTCATGTGGGTGATTTCGGCATAGCAAGACTTGTATCAGCCATTAACGGTACTTCTCGTAAGGGTACAAGTACAATTGGAATAAAAGGGACTGTTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAGTGTCTGCATCTGGTGACATGTATAGCTTTGGAATCCTGATGTTGGAAATGCTTACCGGAAGAAGACCCATTGATGAAGTTTTTGAAGAGGGTCAAAATCTACACGGCTTCGTTGCAATTTCATTTCCTAATAATCTTATAAAGATTTTGGACCCACATCTTGTATCAAGAGATGCGGAAGTAGCAGCACTAGAAGAAAATTGTGGGAATCTTATTCCAAATGTTAAGGAGTTCTTAGTTTCACTTTTTAGGATCGGATATATTTGTTCAATAGAATCATCCAAAAAAAAAAAGAATATTGTGGATGTCGAGTTGATAAAAAAGACCTATCAGGTGTTCGCACTTATAATTAGTAATTCAACTTGTTGCCCAGTTGTTAAGAAACTGAATGGTTTCCCTGGAAGCACATGTGGAAAGCCTTAG 2106 0.3561 MKSFSLLPPILLYLHLLFLFGPNTVMAVTVENQTDYLALLKFKESISSDPYRILDSWNSSIHFCNWSGITCNPKHKKFNEISGKVPAELGNQVNLILLAMENNHFEGFIPTNFENLKSIQVLKLDNNMLSRSIPFSIGNLSQLFYLDMSNNMLEGNIPLSLGKCQKLQYLYLSQNNLQGSIPLEVLRISSLTMGFDLSQNSLSGEIPRTICKNSFQRTIPSNLASLKGLQYLDLSRNRLSGSIPDVIQNISGLKHLNVSFNMLEGEVPIGGVFGNVTQVAMIGNKKLCGGISELHLPLCPIKGSKHTNKHNIKLIAVIAGVVSFLLVLSFIIIIYWMRKTNQKSSFDSPTNDQLTKVSYQELHRGTNGFSDRNLIGSGSFGFVYKGNLMSQDNAVAVKVLNLLKKEAHKSFIAECNALKSIRHRNLVKILTCCSSTDYKGQEFKALVYDYMKNGSLEQWLHPETLNAELPKTLDLTLILNIIIDVASALHYLHQECEQLVLHCDIKPSDVLLDDDMVAHVGDFGIARLVSAINGTSRKGTSTIGIKGTVGYAPPEYGMGSEVSASGDMYSFGILMLEMLTGRRPIDEVFEEGQNLHGFVAISFPNNLIKILDPHLVSRDAEVAALEENCGNLIPNVKEFLVSLFRIGYICSIESSKKKKNIVDVELIKKTYQVFALIISNSTCCPVVKKLNGFPGSTCGKP* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3286 701 ProSiteProfiles Leucine-rich repeat profile. 166 187 IPR001611 GO:0005515
Psa2g3286 701 Gene3D Phosphorylase Kinase; domain 1 349 450 - -
Psa2g3286 701 PANTHER LRR RECEPTOR-LIKE KINASE 212 666 - -
Psa2g3286 701 PANTHER LRR RECEPTOR-LIKE KINASE 22 76 - -
Psa2g3286 701 PANTHER LRR RECEPTOR-LIKE KINASE 79 211 - -
Psa2g3286 701 ProSiteProfiles Protein kinase domain profile. 369 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3286 701 Gene3D Ribonuclease Inhibitor 78 298 IPR032675 -
Psa2g3286 701 ProSitePatterns Protein kinases ATP-binding region signature. 375 398 IPR017441 GO:0005524
Psa2g3286 701 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Psa2g3286 701 Pfam Leucine rich repeat 210 263 IPR001611 GO:0005515
Psa2g3286 701 SUPERFAMILY Protein kinase-like (PK-like) 343 594 IPR011009 -
Psa2g3286 701 SUPERFAMILY L domain-like 33 289 - -
Psa2g3286 701 Gene3D Ribonuclease Inhibitor 27 77 IPR032675 -
Psa2g3286 701 PANTHER OS04G0122200 PROTEIN 212 666 - -
Psa2g3286 701 PANTHER OS04G0122200 PROTEIN 79 211 - -
Psa2g3286 701 PANTHER OS04G0122200 PROTEIN 22 76 - -
Psa2g3286 701 Pfam Protein kinase domain 371 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3286 701 Gene3D Transferase(Phosphotransferase) domain 1 451 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3286 Psa-Chr2 372354974 372357436 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3286 81 674 Receptor kinase-like Gene Family AT3G47570 41.589 8.22e-152 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Psa2g3286 Pkinase 9.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3286 - - mtr:MTR_5g025930 754.207