Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3270 ATGCAAGACATCAAAATGGATTATTTTTTGGTATCCATTCACTTTGAGTTACAAAGGGAAAATCATAAAACTATTTTTTCATATTTGTTGGGTTTGTGCAGAATGGAGAGCACAAGATTAGGCCAATGGTTAAAGTTAAATCTTCTGGTGTTTGTACTGGTATTGCTCAAGGCAGAAGCAGGTTATGTACCAATAACTTATGTCAAGAGCGCGGTAACAAAAGGAGCCGTTTGTTTGGATGGTAGTCCACCAGCTTACCATTTAGATAGAGGATTTGGAAAAGGAAATAACAGTTGGTTAGTTCAATTTGAGGGAGGAGGATGGTGCAACAATATCACTACTTGCCTTGGGCGTAAGATGAATCGCTTAGGTTCATCTAAGCGAATGGGTAATCAAATTGCCTTTTCAGGAATTTTGAATAACAAGAGATTGTTCAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGATACTGTGATGGTTCATCTTTTACTGGTGACGTGGAAGCTGTAAATCCGGTAACAAAGTTGCATTTCAGAGGAGCAAGAGTTTTTAATGCTGTCGTGGAGGATTTGCTAGCAAAAGGAATGAAAAATGCTCAAAATGCTATTATCTCAGGATGTTCAGCTGGTGGTTTAACTTCAATACTTCATTGTGATCGTTTTCGAGCTCTTTTACCGCTGGGAGCTAAAGTGAAATGCCTCTCAGATGCTGGTTATTTTATCAACGCAAGAGATGTATCTGGAACACAGCACATTGAACAGTTCTTCGGTGATGTTGTTACAACACATGGATCTGCGAGGAATTTGCCTAGATCGTGCACTTCAAGGCTCATTCCAAGGCTGTGCTTTTTCCCTCAATATGTTGTATCACAAATCACCACACCGATTTTCTTTGTAAATGCGGCATACGACTCATGGCAGATTAAGAATATTTTGGCACCGGGTAATGCTGATCCTCACGGACACTGGCATAGCTGCAAGCTAGATATAAACAACTGCTCTTCTAATCAACTAGATCTAATGCAAGGCTTTAGAACACAATTCCTAAGAGCATTGACTGTTCTAGGAAACTCTCCATCCAAAGGAATGTTCATAGACTCTTGCTACGCTCACTGCCAAACTGAAATGCAAGAAACATGGTTTAGAAGTGACTCTCCATTGTTGGCCAAGACAACCATTGCAAAAGCCGTAGCAGACTGGTTTTATGAAAGAAGGCTTTTCCATCAAATAGACTGTCCTTACCCCTGCAATCCGAGTTGTCACAACCGCGTTTTTCAACAAGGCATCCCAGGAGTATAG 1305 0.4038 MQDIKMDYFLVSIHFELQRENHKTIFSYLLGLCRMESTRLGQWLKLNLLVFVLVLLKAEAGYVPITYVKSAVTKGAVCLDGSPPAYHLDRGFGKGNNSWLVQFEGGGWCNNITTCLGRKMNRLGSSKRMGNQIAFSGILNNKRLFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPVTKLHFRGARVFNAVVEDLLAKGMKNAQNAIISGCSAGGLTSILHCDRFRALLPLGAKVKCLSDAGYFINARDVSGTQHIEQFFGDVVTTHGSARNLPRSCTSRLIPRLCFFPQYVVSQITTPIFFVNAAYDSWQIKNILAPGNADPHGHWHSCKLDINNCSSNQLDLMQGFRTQFLRALTVLGNSPSKGMFIDSCYAHCQTEMQETWFRSDSPLLAKTTIAKAVADWFYERRLFHQIDCPYPCNPSCHNRVFQQGIPGV* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3270 434 PANTHER PECTIN ACETYLESTERASE 37 430 - -
Psa2g3270 434 Pfam Pectinacetylesterase 57 407 IPR004963 GO:0016787
Psa2g3270 434 PANTHER NOTUM-RELATED 37 430 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3270 Psa-Chr2 370539323 370542587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3270 39 427 Carbohydrate Esterase AT4G19420 63.208 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3270 K19882 - gmx:100776478 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3270 2 370539323 370542587 Psa2g3270 2 370539323 370542587 ECH
Psa2g3270 2 370539323 370542587 Psa4g2555 4 205152258 205160488 PCT