Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3253 ATGGGCATTTGTCTGATAAAAGGCCAATGGCTGTGGCTTCTGTATGTTTTGCTGATACATATTGTAATTGTAATTAATAACATTGAAGCGATCAGTCCTGATGGTGAGGCACTTGTCAGCTTCAGGACAACAATTATTAGCTCTGATGGTATCCTGTTACAGTGGAGGCCTGAGGATCCTGACCCATGTAAATGGAAAGGAGTGAAATGTGATCCAAAAACCAAGAGAGTGACGCATCTGATTCTATCACACCATAAGTTAAGTGGGTCTTTATCACCTGACCTTGGGAAGTTAGATCACCTGAAAGTTCTTGCTCTTCATAACAACAACCTTTATGGGATAATTCCACCAGAATTGGGAAATTGCACGGAATTGCAGGGAATCTTTTTACAGGGTAATTACCTTAGTGGAGTAATTCCAAGTGAAATAGGAAATCTCTCACAGCTCCAAAATTTGGATATATCAAGCAATTCCCTTGGAGGGAATATTCCAGTATCAATTGGAAAGTTATATAATCTAAAAAAGTTCAATGTATCGACCAATTTTCTGGTCGGACCAATACCTTCTGATGGTGTCCTAGCCCACTTTACAGAAAGCTCGTTTGTTGGAAACCGAGGTTTGTGTGGAGTACAAATTGATTCAACATGTAAAGATGATGGTTCGCCTGGGGAGAAATCTTCAGACCAAAATCAAAATGAAAAGAAGAAATATTCTGGCCGACTTCTCATCAGTGCATCAGCAACTGTGGGTGCACTACTTTTGGTGGCACTTATGTGCTTCTGGGGTTGTTTTCTTTATAAAAAGTTTGGTAAAAATGATAGAGTTAGTCTTGCAGTGGATGTTGGTCCAGGTGCATCGATCGTGATGTTTCATGGAGACCTACCATATTCTTCGAAAGACGTTATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATAGGAGTAGGGGGATTTGGAACTGTTTACAAGCTCGCAATGGATGATGGGAATGTATTTGCATTGAAAAGGATTGTAAAGATGAATGAGGGCTTTGATCGATTTTTTGAGAGGGAGCTTGCAATTCTTGGTAGCATCAAACACCGTTATTTAGTGAACTTACGTGGATATTGCAACTCACCTACCTCAAAGTTGTTAATATATGACTACCTACCTGGTGGTAGTCTTGATGAAGTTCTTCATGAAAGATCCGAGCAACTAGACTGGGATTCACGGTTGAATATAATCATGGGAGCTGCAAAAGGGCTTGCGTACTTACACCATGATTGTTCACCTAGGATCATACACCGAGACATAAAGTCAAGCAACATTTTGCTCGATGGAAAATTGGATGCTCGGGTTTCTGATTTTGGACTTGCCAAACTTCTGGAAGATGAAGAATCTCACATCACTACTATTGTTGCTGGAACATTCGGTTATCTAGCTCCAGAGTATATGCAAAGTGGCAGAGCAACCGAGAAGACGGATGTTTATAGTTTTGGGGTGTTGACACTTGAAGTGCTTAGTGGAAAGCGGCCAACAGACGCATCATTCATTGAAAAGGGTCTCAATATTGTTGGTTGGTTGAATTTCCTTATTACCGAAAATAGGCCGAGGGAAATTGTGGATCTACTATGTGACGGGGTGCAGGTGGAGAGCCTTGATGCCTTGCTCTCTGTGGCCATTCAGTGTGTTTCCTCGAGTCCAGAGGATCGACCCACTATGCACCGAGTGGTCCAGTTGCTCGAATCGGAGGTCGTAACTCCATGCCCAAGTGACTTCTATGACTCGGACTAG 1776 0.4178 MGICLIKGQWLWLLYVLLIHIVIVINNIEAISPDGEALVSFRTTIISSDGILLQWRPEDPDPCKWKGVKCDPKTKRVTHLILSHHKLSGSLSPDLGKLDHLKVLALHNNNLYGIIPPELGNCTELQGIFLQGNYLSGVIPSEIGNLSQLQNLDISSNSLGGNIPVSIGKLYNLKKFNVSTNFLVGPIPSDGVLAHFTESSFVGNRGLCGVQIDSTCKDDGSPGEKSSDQNQNEKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRVSLAVDVGPGASIVMFHGDLPYSSKDVIKKLETLNEEHIIGVGGFGTVYKLAMDDGNVFALKRIVKMNEGFDRFFERELAILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEVLHERSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGKLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLTLEVLSGKRPTDASFIEKGLNIVGWLNFLITENRPREIVDLLCDGVQVESLDALLSVAIQCVSSSPEDRPTMHRVVQLLESEVVTPCPSDFYDSD* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3253 591 SUPERFAMILY Protein kinase-like (PK-like) 292 575 IPR011009 -
Psa2g3253 591 SMART serkin_6 308 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3253 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Psa2g3253 591 PANTHER RECEPTOR-LIKE PROTEIN 55 3 589 - -
Psa2g3253 591 SUPERFAMILY L domain-like 33 197 - -
Psa2g3253 591 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Psa2g3253 591 Gene3D Phosphorylase Kinase; domain 1 283 383 - -
Psa2g3253 591 Pfam Protein kinase domain 310 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3253 591 ProSitePatterns Protein kinases ATP-binding region signature. 314 340 IPR017441 GO:0005524
Psa2g3253 591 Gene3D Transferase(Phosphotransferase) domain 1 384 581 - -
Psa2g3253 591 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 3 589 IPR031071 GO:0004672|GO:0005524|GO:0030244
Psa2g3253 591 Gene3D Ribonuclease Inhibitor 32 218 IPR032675 -
Psa2g3253 591 ProSiteProfiles Protein kinase domain profile. 308 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3253 Psa-Chr2 369463009 369473356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3253 1 584 Receptor kinase-like Gene Family AT2G35620 75.514 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Psa2g3253 Pkinase 9.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3253 - - gmx:100819230 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3253 2 369463009 369473356 Psa2g3253 2 369463009 369473356 ECH