Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3250 ATGTACGGTGGTGGTGGTGGAGGAGACGATGCCCTGGCTGCTCGCCTCGGGTTACTCTCCCCGTCGCTGCTTATCCCGACGACGTCCATGATTTCCCGCGAGATGTCTCCGGCGCCTGTAAGGGAAGAGAGGCTTCCGTCTCAGCCGCAGTGGAGTCAGCAGGAGACGAGAGAGTTCATAGCGATACGCGCGGAGTTGGAGAGGGACTTCACTGCTTCGAAGAGGAACAAGACGCTTTGGGAAGTGGTGAGCTCTAAGATGAGGGAGAGAGGGTATAGAAGGAGCCCTGAACAATGCAAATGCAAGTGGAAGAATCTTGTTAATCGTTATAAGGGAAAAGAGACATCTGATCCAGAGCATGGCAAGCAATGCCCATTTTTTGAAGAATTGCATGCAGTTTTTACCGAAAGAGCACATAACATGCAGCGGTTACTTCTTGAATCTGAAACTCGTCCAGCTCAAGCAAAGAAAGGAGTGAAAAGAACAAGTGGATATCGATCCTCAGAGGAATTCTCAGAAGACGATGAGGAGGTTGAAGACGACAGTGAAGAGGAGAAACCGGCGAGAAGCAATACCCGTAAAAGGAAAGCTAGCAAAATTGCAATGGAGAAGTCTTCAAGGGCAAACAATGCAAGCAGTAGTACTAGTAATGTTCAGGAAATGCTCAAGGATTTTTTCCAGCAACAACTAAGGATGGAGATGCAGTGGAGGGAGATGATGGAAAGGCGCGCACATGAAAGACAACTGTTTGAACAGGAATGGCGACAGTCAATGGAAAAGCTTGAAAGGGAGAGGTTAATGATTGAGCAGGAATGGAGGGAGAGAGAAGAACATAGGAGACTGAGGGAAGAAAGTAGGGCAGAGAGAAGGGATGCTTTGTTGACTACTCTTTTAAACAGGCTCACTCATGAATCTAACTAA 921 0.4777 MYGGGGGGDDALAARLGLLSPSLLIPTTSMISREMSPAPVREERLPSQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSSKMRERGYRRSPEQCKCKWKNLVNRYKGKETSDPEHGKQCPFFEELHAVFTERAHNMQRLLLESETRPAQAKKGVKRTSGYRSSEEFSEDDEEVEDDSEEEKPARSNTRKRKASKIAMEKSSRANNASSSTSNVQEMLKDFFQQQLRMEMQWREMMERRAHERQLFEQEWRQSMEKLERERLMIEQEWREREEHRRLREESRAERRDALLTTLLNRLTHESN* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3250 306 Gene3D - 51 112 - -
Psa2g3250 306 MobiDBLite consensus disorder prediction 184 202 - -
Psa2g3250 306 ProSiteProfiles Myb-like domain profile. 51 107 IPR001005 -
Psa2g3250 306 Pfam Myb/SANT-like DNA-binding domain 49 132 IPR044822 -
Psa2g3250 306 Coils Coil 251 271 - -
Psa2g3250 306 SMART sant 47 109 IPR001005 -
Psa2g3250 306 CDD GT1 49 114 - -
Psa2g3250 306 PANTHER - 48 304 - -
Psa2g3250 306 MobiDBLite consensus disorder prediction 34 53 - -
Psa2g3250 306 MobiDBLite consensus disorder prediction 203 217 - -
Psa2g3250 306 MobiDBLite consensus disorder prediction 146 217 - -
Psa2g3250 306 PANTHER - 48 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3250 Psa-Chr2 369259880 369264869 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3250 49 306 Trihelix Transcription Factor Family AT2G38250 45.802 3.17e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Psa2g3250 Myb_DNA-bind_4 1.1e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3250 - - gmx:100812635 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3250 2 369259880 369264869 Psa2g3250 2 369259880 369264869 ECH