Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3231 ATGGGATATGATTCTGATAGCCCCTCACGAGATGAAGATGACGAAGAAGAATATGAGGAGTCTGGCAAGGGTAATGGTTTATTTGGGTTCATGTTTGGAAATGTTGATAACTCTGGTGATCTCGATGCTGATTATCTTGATGAGGATGCAAAGGAGCATCTCTCTGCATTGGCTGACAAGCTGGGATCATCACTGACAGATATAGATTTGTCAGGAAAGTCACCACATACACCACATGGCATTGTTGAACAAGACTGTGGTGAAAAGGCTGACGATGCTGTTGATTACGAAGATATTGATGAAGAATATGATGGTCCGGAGACTGAAACTGCAAATGAAGAGGACTATTTATTGCCAAAAAAGGAATTTTTCGCTGCCGAAGCCTCTCTTGAAGCTTTGGAGCACAAAACTTCCGTCTTCGATGATGAAAACTATGATGAAGAATCTGAAAAGGAACAAGACTTAGAGAGTAATGATGCTAAAGTTGATAACATCTCTTTAGCTGTAGAGCAGGAGGAGAGCTTTGTAGATGCATCTACAGGAGGGAATGCTCTTGAGCATGATTTACAAGTTGGGTCACCACAGACTGAAGAACTGGATACTGATGTACAAATACCTGAGCAGGAAGGACCTGAAGCTTTAAAAAGATCTATGACTGCACCGTTGCCTGTATTGTACGTGGATGATGGAAAAGTAGTTTTACGTTTCTCTGAAATCTTCGGTATTCAGGAACCTCCCCGAAAGGGAGAAAAGAAAGAGCGTCGGCATTCCACTCCTAGAGATAGATACAAGTCTTTGGATTTATCTGATGATATTGTAGAAGAGGATGAAGAGGAGTTCCTTAAAGGCTTCTCTCAGAGTCTCACACTTAGTAAACAGGTCTGTGTAGTCGATACCGATGTATCAGAAAACAATAATGTTGACTTGGAATTTCCAAAATTTGGATTTCTTCATGGAGATGCCTCACTTACTGCAAAAGATGATCTGCAACCAAAGGACTCTTGTCTTAGTGGTGAACCAATGAAAGGGGATTTTGCAAATGAACTTTCTTGGAAAGATCATCCCCTCATGTTGGCCAACTTTTATCCTCTTGATCAGCGAGACTGGGAAGATGAAATCCTTTGGGGCAACTCTCCTGTTGCAAGTGATAATGATAATACTATTGATAGCTGTGAAATTTCTGGACCTGAATTGAGAGCTTCTGGTGATGGTGAAATAGAAATTGAAAGTGGGATACAAAATCTTCAGTCAGATCCCCATAAGATACTGGAGAAGAAAGATCGTAATGTATTCATTTGTTGCTCTCCTGTTTCATTGGACCCCTTTGACTCAAGGGATTCTAATGGGGCTAAAACTGATTCAATATCTGAAAGTCCATTTCATCCCCAACTTCTGAGGCTAGAAGTAGACGGTTCTCATCTTGAAGATGAAAGAGGGGCAGATATATCTGAGAATCATAATCAAAGTGGTCAAGTAAAGCGTTTGACCAAGGTTATGTCACAAAACAGAGACCTCATGGATGACTCGTGGATAAACAAGATAATGTGGGAAGAGCTTGACAGGCCTAAAATGAAACCAAAGCTTATATTTGATCTTCAGGATAATCAGATGCACTTCGAAGTTTTGGATAGCAAGGATGGTACCCATCTTCGCGTTCATGCCGGGGCTATGATTTTAGCCCGCTCTTTGAATTCAACTAACGTGGACTCTTCTGAGCTACCGGGACTTGGAGGTCAATATGGATGGAGATACGTTGCTAATGACAAACACTATTCAAATCGGAAAACTTCTCAGCAACTGAAATCAAACTCAAAAAAACGCTCAGCTCACGGTGTCAAAATTTTTCACTCGCAACCTGCACTGAAACTGCAGACCATGAAATTGAAGTTGAGCAATAAAGATATTGCAAATTTTCACCGGCCTAGAGCACTGTGGTATCCCCATGATAATGAGGTGGCTGTTAAAGAACAAGGAAAATTACCAACAAAAGGAGCCATGAAAATTATTATGAAAAGCTTGGGTGGCAAGGGGTGTAAACTGCATGTCGATGCTGAAGAAACTATCTCTTCTGTTAAAGCAAAAGCTTCCAAAAAGCTAGATTTCAAGGCATCCGAAGCAGTGAAAGTATTTTATTTGGGTAGGGAGCTTGAAGATCACATGCCACTTATTGCACAAAATGTTCAGCCAAACTCCTTGTTACATCTTGTCCGTACAAAGATACATTTATGGCCTAGGGCACAAAGAGTTCCTGGTGAGGACAAGTCGTTGCGTCCTCCAGGGGCATTCAAGAAAAAATCTGATCTGTCTGTAAAAGATGGACATGTGTTTCTTATGGAGTATTGTGAAGAAAGGCCTTTACTTCTGAGCAATGTTGGAATGGGTGCAAGACTTTGCACATATTATCAAAAAAGTTCACCGGAAGACCAATCTGGGTCCTTATTACGCAACACAGATAGTAGCTTGGGGCATTTTATTTCTCTGGACCCTGCCGACAAATCTCCTTTTCTTGGTGATTTAAAACCTGGTAGCAGTCAGTCATCACTCGAGACCAATATGTATAGAGCACCCATATTTACTCATAAAGTTCCACCAACTGACTACCTGCTGGTTCGTTCGTCAAAGGGAAAGCTATCATTAAGGCGCATTGATAAAGTTAATGTTGTTGGACAGCAGGAGCCTCTCATGGAGGTGTTCTCGCCTGGAAGTAAGAATCTTCAGACTTTCATGATGAACAGGCTATTGGTACACATGTGCCGCGAGTTCCAAGCTGCAGAGAAGCAGCACTTGTCTCCATACATTCGCATTGACTACTTCCTTTCACAGTTTCCCTTCCTATCAGAAGCCTCATTTCGTAAGAGGATCAAGGAATATGCTAATTTACAGAGAGGTGCACATGGGCAATCCATTTTTGTTAAAAAGCGTAATTTCCGCATGTGGTCGGAAGATGAATTGAGGAAAATGGTGACACCAGAGCTTGTTTGTGCTTTTGAAAGCATGCAAGCTGGCCTCTACCGCCTAAAACATTTAGGAATTACTGAAACACATCCGAATAATATTTCATCTGCAATGAGTCGGCTTCCTGATGAAGCAATAGCACTGGCTGCTGCATCACACATTGAGAGGGAACTGCAAATTACTCCATGGAACTTGAGTAGCAATTTTGTTGCCTGTACAACTCAGGGTAAGGAAAATATTGAACGGATGGAAATTACTGGCGTTGGTGATCCATCAGGCCGCGGCTTGGGTTTTAGCTATGCTAGGGCACCTCCAAAGGCACCAGTGTCTAGTGCAGTGGTGAAGAAAAAAGCAGCTGCTGGCAGGGGAGGTTCCACTGTTACCGGTACGGATGCTGATTTACGTAGATTAAGCATGGAGGCTGCACGAGAGGTACTTCTTAAATTCAATGTTCCCGAGGAAGTCATTGCAAAACAAACTAGATGGCATCGCATTGCTATGATACGCAAACTTTCAAGTGAGCAAGCTGCGTCTGGGGTTAAGGTTGATCCAACAACTATAGGAAAATATGCCCGTGGTCAGCGAATGTCCTTTCTTCAGTTACAGCAGCAGACCAGAGAGAAGTGCCAGGAGATTTGGGATAGGCAAGTTCAGAGTTTGGCAGCTTTAAATGGTGACGATAATGAGAGTGATTCAGAAGGAAATAGTGATCTAGATTCTTTTGCTGGAGATCTGGAAAATTTGCTTGATGCTGAGGAATTTGAAGAGGGAGAAGAAGGCACTAATGACTTAAAACGTGATAAGGGAGACGGTGTTAAGGGTCTTAAAATGAGAAGACGCACAACCTTGGCTCAGGCAGAGGAGGAAATAGAAGATGAAGCAGCTGAGGCCACTGAATTATGCAGGCTGCTTATGGATGATGACGGAGCTTACCGGAAGAAAAAGAAGAATGCTAGGGTTATGGTGGATGCAAGAAGATTGATACCGAAACTACAGCCAAAATTTGTCTTTGACAGCACTGAACAAGTAAAGCAAACAACAAATACAATATTGCAACACGATGGAACTAATCATTTTAAGGAGGATGCAATTACAGATCATAGGGAGGATGATAAATTTTCTGCTAAGAAAAGCAAATCAGTTAAGGTCAATAAAGCAAAGAAGAGTGACATTTCACCTATTAGTCTATCAAATAAAAAAATCAAACTAAATATGGGAGAAGGAATCAAGAACCAGGTATTTAAGGAGAAAAAACCATCAAGGGAAACTTTCGTTTGTGGAGCATGTGGCCAGCTTGGGCACATGCGAACGAACAAGAATTGTCCTAAATATGGTGAAGATCTAGAAGCACAACTTGAATCTACGGACATGGAAAAATTAACTGGAAGATCCAGCTTTGTTGATTCTTCTAGCCAGTCTCAGCATAAACTCTCATCCAAAAAGTCAATATCAAAGATCGTAACAAAAATTGCTCCAGTTGAGAATTCAACAAAAATTCCGTTGAAGTTCAAATGCAGTTCGACAGAGAAATCTTCTGATAGACCTGCAATAGAAACCTTGCAGAGTTCTGACAAGCCAGTCACTTCTGACTCAGAAACTGCCAAGTCTGCTAAGATTAGTAAGATAATTATTCCAAACAAAGTGAAATCAGATGATACACAGGCTGAATCACTTAAGCATGCTATTGTTATACGTCCTCCTACTGATCCAGGTAGAGGCCAGGTTGATTCTCATAAGTTCCCAATTAAAATCCGCCCGCCTGCAGAAATAGATAGGGAGCAAAGTCACAAAAAGATTGTTATAAAACGTACAAAGGATGTTGCTGATCTGGAACTTGACAGTCCTGGTGGAAACACAGGACTTGAACACAGAAAAACTAAAAGAATTGTGGAATTGGCGAATTTTGAGAAGCACAGAAAGCAGGAGACCATGTATTCAACTGAAAGTATGGCAAAATGGAATTCTAAAGAGGATAGAAGATGGTGGGAAGAGCAAGAGAAACGAAGAAATGAAGTGAGACTTAGAGAAAACAACGCAAAGAGGCATGGCACAGAAGAAAGGAGGATGCGCAAGGAACGAGAAAGGTTAGATGAGTTAAAAAGATATGAAGAAGATATTAGAAGAGAGAGGGAAGAAGAAGAACGACAAAAAGCTAAGAAGAAAAAGAAAAAGAGAAAGCCCGATTTAAGAGATGAGTATTTAGATGATCCCAGGGAAAGAAGATATGGTAAGAGGATGCTAGAAAGAGAACGGAGTGGAAAACGGAGATCAGTTGTTGAGACAGGAAAGATTAGTGGAGATTTTATGCCGCCAACTAAACGCCGAAGAGGGGGAGGAGGAGAGGTTGGTTTGGCAAATATCTTGGAGAGTATCGTGGATGCCATTGTGAAAGATAGGCACGATCTGTCTTATCTTTTTGTGAAACCAGTGCCCAAGAAAGAGGCCCCTGACTACCTGGATATCATAGAGACGCCTATGGATCTTTCCAAAATCAGGCAACGGGTACGGAATATGGAGTACAAAAGTCGCGAAGACTTCAGACATGATGTATGGCAAATTACTTTTAATGCCCATAAATATAATGATGGACGAAATCCTGGAATCCCTCCAGTTGCGGATATGCTTCTGGAATATTGTGATTATTTGTTGAATGAGAATGATGATAATCTTACTGCCGCTGAAGCTGGTATTGAAATTAAAGATTTCTAA 5664 0.4135 MGYDSDSPSRDEDDEEEYEESGKGNGLFGFMFGNVDNSGDLDADYLDEDAKEHLSALADKLGSSLTDIDLSGKSPHTPHGIVEQDCGEKADDAVDYEDIDEEYDGPETETANEEDYLLPKKEFFAAEASLEALEHKTSVFDDENYDEESEKEQDLESNDAKVDNISLAVEQEESFVDASTGGNALEHDLQVGSPQTEELDTDVQIPEQEGPEALKRSMTAPLPVLYVDDGKVVLRFSEIFGIQEPPRKGEKKERRHSTPRDRYKSLDLSDDIVEEDEEEFLKGFSQSLTLSKQVCVVDTDVSENNNVDLEFPKFGFLHGDASLTAKDDLQPKDSCLSGEPMKGDFANELSWKDHPLMLANFYPLDQRDWEDEILWGNSPVASDNDNTIDSCEISGPELRASGDGEIEIESGIQNLQSDPHKILEKKDRNVFICCSPVSLDPFDSRDSNGAKTDSISESPFHPQLLRLEVDGSHLEDERGADISENHNQSGQVKRLTKVMSQNRDLMDDSWINKIMWEELDRPKMKPKLIFDLQDNQMHFEVLDSKDGTHLRVHAGAMILARSLNSTNVDSSELPGLGGQYGWRYVANDKHYSNRKTSQQLKSNSKKRSAHGVKIFHSQPALKLQTMKLKLSNKDIANFHRPRALWYPHDNEVAVKEQGKLPTKGAMKIIMKSLGGKGCKLHVDAEETISSVKAKASKKLDFKASEAVKVFYLGRELEDHMPLIAQNVQPNSLLHLVRTKIHLWPRAQRVPGEDKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNVGMGARLCTYYQKSSPEDQSGSLLRNTDSSLGHFISLDPADKSPFLGDLKPGSSQSSLETNMYRAPIFTHKVPPTDYLLVRSSKGKLSLRRIDKVNVVGQQEPLMEVFSPGSKNLQTFMMNRLLVHMCREFQAAEKQHLSPYIRIDYFLSQFPFLSEASFRKRIKEYANLQRGAHGQSIFVKKRNFRMWSEDELRKMVTPELVCAFESMQAGLYRLKHLGITETHPNNISSAMSRLPDEAIALAAASHIERELQITPWNLSSNFVACTTQGKENIERMEITGVGDPSGRGLGFSYARAPPKAPVSSAVVKKKAAAGRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTIGKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLAALNGDDNESDSEGNSDLDSFAGDLENLLDAEEFEEGEEGTNDLKRDKGDGVKGLKMRRRTTLAQAEEEIEDEAAEATELCRLLMDDDGAYRKKKKNARVMVDARRLIPKLQPKFVFDSTEQVKQTTNTILQHDGTNHFKEDAITDHREDDKFSAKKSKSVKVNKAKKSDISPISLSNKKIKLNMGEGIKNQVFKEKKPSRETFVCGACGQLGHMRTNKNCPKYGEDLEAQLESTDMEKLTGRSSFVDSSSQSQHKLSSKKSISKIVTKIAPVENSTKIPLKFKCSSTEKSSDRPAIETLQSSDKPVTSDSETAKSAKISKIIIPNKVKSDDTQAESLKHAIVIRPPTDPGRGQVDSHKFPIKIRPPAEIDREQSHKKIVIKRTKDVADLELDSPGGNTGLEHRKTKRIVELANFEKHRKQETMYSTESMAKWNSKEDRRWWEEQEKRRNEVRLRENNAKRHGTEERRMRKERERLDELKRYEEDIRREREEEERQKAKKKKKKRKPDLRDEYLDDPRERRYGKRMLERERSGKRRSVVETGKISGDFMPPTKRRRGGGGEVGLANILESIVDAIVKDRHDLSYLFVKPVPKKEAPDYLDIIETPMDLSKIRQRVRNMEYKSREDFRHDVWQITFNAHKYNDGRNPGIPPVADMLLEYCDYLLNENDDNLTAAEAGIEIKDF* 1888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3231 1887 MobiDBLite consensus disorder prediction 1692 1742 - -
Psa2g3231 1887 SUPERFAMILY Ubiquitin-like 636 736 IPR029071 -
Psa2g3231 1887 Pfam TATA box-binding protein binding 15 62 IPR009067 -
Psa2g3231 1887 ProSitePatterns Bromodomain signature. 1788 1845 IPR018359 -
Psa2g3231 1887 MobiDBLite consensus disorder prediction 136 160 - -
Psa2g3231 1887 PANTHER BNAA01G26290D PROTEIN 11 1303 - -
Psa2g3231 1887 PANTHER BNAA01G26290D PROTEIN 1356 1882 - -
Psa2g3231 1887 MobiDBLite consensus disorder prediction 1 26 - -
Psa2g3231 1887 Gene3D - 648 738 - -
Psa2g3231 1887 Coils Coil 1261 1292 - -
Psa2g3231 1887 SMART bromo_6 1762 1873 IPR001487 GO:0005515
Psa2g3231 1887 Pfam Ubiquitin family 670 738 IPR000626 GO:0005515
Psa2g3231 1887 Gene3D - 19 68 IPR036741 -
Psa2g3231 1887 ProSiteProfiles Bromodomain profile. 1783 1853 IPR001487 GO:0005515
Psa2g3231 1887 MobiDBLite consensus disorder prediction 1712 1742 - -
Psa2g3231 1887 SUPERFAMILY TAF(II)230 TBP-binding fragment 21 59 IPR036741 -
Psa2g3231 1887 PRINTS Bromodomain signature 1786 1799 IPR001487 GO:0005515
Psa2g3231 1887 PRINTS Bromodomain signature 1800 1816 IPR001487 GO:0005515
Psa2g3231 1887 PRINTS Bromodomain signature 1816 1834 IPR001487 GO:0005515
Psa2g3231 1887 PRINTS Bromodomain signature 1834 1853 IPR001487 GO:0005515
Psa2g3231 1887 Coils Coil 1674 1711 - -
Psa2g3231 1887 MobiDBLite consensus disorder prediction 1490 1521 - -
Psa2g3231 1887 SMART ubq_7 666 738 IPR000626 GO:0005515
Psa2g3231 1887 CDD Bromodomain 1772 1868 - -
Psa2g3231 1887 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 11 1303 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Psa2g3231 1887 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1356 1882 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Psa2g3231 1887 SUPERFAMILY Bromodomain 1754 1874 IPR036427 GO:0005515
Psa2g3231 1887 ProSiteProfiles Ubiquitin domain profile. 666 736 IPR000626 GO:0005515
Psa2g3231 1887 CDD Ubl_TAFs_like 666 737 - -
Psa2g3231 1887 Pfam Bromodomain 1783 1849 IPR001487 GO:0005515
Psa2g3231 1887 Pfam Protein of unknown function (DUF3591) 586 1152 IPR022591 -
Psa2g3231 1887 Gene3D - 1764 1886 IPR036427 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3231 666 736 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 38.028 2.39e-06 47.8