Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3224 ATGGAGTCCAGTGAGCATGAAAGGTCGTCAGTTAGAGAGTTTCATGCAAATGGAAGCAGCATGAGTACATCTGAAGTTGAGGCTAAGCTTGATGAAGGAAATATTCAAGAGGCGGAATCTTCGTTGCGAGAAGGGTTGTCACTCAATTTCGAGGAAGCAAGGGCTCTTCTTGGGAAGTTGGAGTATCAGAGAGGTAATGTAGAAGGCGCTCTTCGTGTCTTTGATGGAATCGATCTCCAAGCTGCAATCCAGCGGTTGCAACCCTCCTTGTCTGAAAAACCACCCGTCAAAAAAGGCCGCCCTCGCACAGAATCACCTTCTTCAGTCTCTCAACATGCTGCTAGTTTGGTGCTTGAAGCCATCTACTTAAAATCCAAGTCTCAACAAAAACTCGGGAAATTTGCTGAAGCTGCTAATGACTGTAAACAGATTCTTGATGCTGTTGAGAAGATATTTTATCAGGGTATACTTGATTTTCAAGTGGACGACAAATTGCAAGAGATAGTCAGCCATGCAGTAGAGCTCCTTCCAGAGCTTTGGAAACAAGGTGGTTTCTACGATGAGGCAATCTCTGCTTATAGGCGCGCCCTTCTTAGTCAATGGAACCTTGATAATGATTGTTGTTCAAGAATTCAAAAATCGTTTGTTGTTTTTCTTCTGTACAGTGGTGTGGAGGCAAGTCCACCCAGTTTAGCCGTTCAGATTGACGGTTATTATGTGCCTAAAAATAATCTCGAAGAGGCGATTCTGCTGTTAATGATTCTTATAAAGAAGTTTTGTCATGGTAAGATAAAATGGGATCCTTCAATCATGGAACACCTAACTTTCGCATTTTCTATATGTAGCCAAACTTCTATTTTAGCAAAGCAATTCGAAGACTTGATGCCTGGAGTATACCATCGTATTGATCGTTGGAATTCTTTAGCTTTATGTCATTTTGCAGCCGGACAAAATGTCAGTGCTTTGAATCTGCTAAGAAAATCGTTGCACAAACACGAACGACCGGATGACCTTACATCGTTATTATTAGCTGCCAAGATCTGCAGTGAGGATCCTTATCTTGCTGACGAGGGAGCCGGCCATGCACAGAGAGCTTTCAGTAATGCTCATGGTCCGAATGAGCATTTAAAAGGTGTCGCTCTTCGGATGTTGGGACTTTGCCTTGGAAAGCAAGCTAAGGTTGCTTCCTCGGACTTCGAGAGATCTCGGCTTCAGTCCAAAGCCCTGGAGTCATTAGAGGAGGCAACTAGATTGGAGAAAAACAATTCTGATCTGATTTTTGAGTTGGCTGTTCAGTACGCGAAGCATCGAAATTTGACTGCTGCTTTGCGTTCCGCGCGGCATTTCTTCAATGAAACCGGTGGCTCTGTAATCAAAGCTTGGATATTGCTTGCTCTGATTCTGTCTGCGCAGCAAAGATTTCCGGAAGCTGAAGTGGTGACAGATGCTGGTTTAGATCAGACTGCAAGATGGGAGCAGGGGTCTCTTCTTAAGCTTAAAGCAAAGCTGAAGATCTCCCAATTAAAACCGATGGATGCTATTGAAACTTATCGCTCCCTTCTTGCATTGGTTCAAGCCCAGAGGAAATCGTCAGGGTCTTTCCAAATTAGTTCAAAGGTTGAAGATGATAAAGTTAATGAATTCGATATTTGGCACGGTCTTGCAAATTTGTATGCCAGTCTTTCTCATTTGAAGGATGCTGAAATCTGTTTGCAAAAGGCCAGGGAATTGAAGGAGTATTCTGCAGCAATTTTGCACACTGAAGGTATTTTGTTCGAAGGACGCGGCCAGAATATAGACGCTCTCAATGCTTCTATTAATGCTATACTAATTGAACCCAACCACATTCCTAGCAAAATCTTAATGAGTGCTTTGATTCATAAAATGGGTACAAAGGCATTGCCTGCTGCAAGAAGCATGCTGTCTGATGCGCTTAGAATAGAACCAACCAACCGGATGGCTTGGTATTACTTGGGATTGGTTCACAAGCACGATGGCCGAATCGGTGATGCTGTGGACTGCTTCCAGGCAGCTTCCATGCTGGAAGAATTAGATCCCATTGAAAGTTTCAGCACTTGTTTTTGA 2085 0.4336 MESSEHERSSVREFHANGSSMSTSEVEAKLDEGNIQEAESSLREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQPSLSEKPPVKKGRPRTESPSSVSQHAASLVLEAIYLKSKSQQKLGKFAEAANDCKQILDAVEKIFYQGILDFQVDDKLQEIVSHAVELLPELWKQGGFYDEAISAYRRALLSQWNLDNDCCSRIQKSFVVFLLYSGVEASPPSLAVQIDGYYVPKNNLEEAILLLMILIKKFCHGKIKWDPSIMEHLTFAFSICSQTSILAKQFEDLMPGVYHRIDRWNSLALCHFAAGQNVSALNLLRKSLHKHERPDDLTSLLLAAKICSEDPYLADEGAGHAQRAFSNAHGPNEHLKGVALRMLGLCLGKQAKVASSDFERSRLQSKALESLEEATRLEKNNSDLIFELAVQYAKHRNLTAALRSARHFFNETGGSVIKAWILLALILSAQQRFPEAEVVTDAGLDQTARWEQGSLLKLKAKLKISQLKPMDAIETYRSLLALVQAQRKSSGSFQISSKVEDDKVNEFDIWHGLANLYASLSHLKDAEICLQKARELKEYSAAILHTEGILFEGRGQNIDALNASINAILIEPNHIPSKILMSALIHKMGTKALPAARSMLSDALRIEPTNRMAWYYLGLVHKHDGRIGDAVDCFQAASMLEELDPIESFSTCF* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3224 694 MobiDBLite consensus disorder prediction 14 29 - -
Psa2g3224 694 MobiDBLite consensus disorder prediction 88 109 - -
Psa2g3224 694 PANTHER PROTEIN NPG1 1 692 IPR043376 -
Psa2g3224 694 Coils Coil 401 421 - -
Psa2g3224 694 Gene3D Tetratricopeptide repeat domain 21 202 IPR011990 GO:0005515
Psa2g3224 694 SUPERFAMILY TPR-like 403 678 IPR011990 GO:0005515
Psa2g3224 694 Gene3D Tetratricopeptide repeat domain 457 689 IPR011990 GO:0005515
Psa2g3224 694 MobiDBLite consensus disorder prediction 1 38 - -
Psa2g3224 694 Gene3D Tetratricopeptide repeat domain 238 456 IPR011990 GO:0005515
Psa2g3224 694 PANTHER CALMODULIN-BINDING PROTEIN 1 692 - -
Psa2g3224 694 SUPERFAMILY TPR-like 53 448 IPR011990 GO:0005515
Psa2g3224 694 SMART tpr_5 652 685 IPR019734 GO:0005515
Psa2g3224 694 SMART tpr_5 118 151 IPR019734 GO:0005515
Psa2g3224 694 SMART tpr_5 548 581 IPR019734 GO:0005515
Psa2g3224 694 SMART tpr_5 582 615 IPR019734 GO:0005515
Psa2g3224 694 SMART tpr_5 302 335 IPR019734 GO:0005515
Psa2g3224 694 SMART tpr_5 458 491 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3224 Psa-Chr2 368066670 368072812 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3224 3 692 Calmodulin-binding Proteins AT2G43040 70.461 0.0 959
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3224 K21843 - gmx:100814609 1136.71