Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3216 ATGGAGAGGTACAAAATAATCAAGGAAGTTGGTGATGGAACATTTGGGAGTGTCTGGAGAGCTATTAGTAAGCAAGCTGGCGAAGTTGTTGCGATCAAGAAAATGAAAAAGAAATATTACTCTTGGGAAGAGTGTGTAAATCTCAGAGAAGTCAAGTCTTTACGAAAAATGAACCACCCAAATATTGTGAAATTGAAGGAAGTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTTGAGTACATGGAATGCAATCTATACCAACTTATGAAAGACAGGGAAAAATTGTTCTCTGAAAGTGAAATTAGAAACTGGTGTTTTCAAGTTTTCCAAGGTCTGGCTTACATGCATCAGCGTGGTTACTTCCATCGCGACCTTAAACCTGAAAATTTGCTGGTTTCTAAGGATATTATCAAAATTGCTGATTTTGGCCTAGCCCGAGAGATCAATTCACAACCACCCTACACTGAGTATGTCTCCACACGATGGTATCGTGCTCCTGAAGTGCTGCTTCAGTCTTATATCTATAATGCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCCGAGCTCTTCTCTCTACGACCTCTTTTTCCCGGAGCCAGTGAGGCAGATGAGATCTACAAAATATGTGGTGTGATAGGCAGTCCAACCACTGAATCATGGGCTGTTGGACTCAAACTTGCAAGAGATATTAATTATCAGTTTCCACAGCTTGCTGGCGTAAACCTTTCTTCATTGATCCCATCTGCAAGTGATCATGCAATCAGCCTTATCCAATCACTTTGCTCTTGGGATCCCTGCAAGAGGCCAACAGCTTTAGAGGCCCTTCAACATCCTTTCTTCCAGAGTTGCTTTTACATTCCTCCATCCCTTCGCTCCAGAGCAATAGCGAGAACCCCTCCACCTGCAACTAGGGGATCACTGGATCAGCAAGGGGTCAAGAGATATCCCGGTGCTTTACCCAACTCAAAACTCACCAATTATTTTCCATCTCCAAAGTTACAGCCTTCTTCAGGTGTGCAACGGAAGTTGGATATGGTAAATCAGGATGACATTCAGAATGATAAATCAATGAAGACTACTACACAATTGAAGTATCGACAACCAGGAAAGGACAGTCAAACTTCTATAAACAAAGGAAGATCTACACGAGGTGCTTTAGAAACAGCTGAGAGGTTGGCCAATATGTCTATTGGCACTCGAAGACAGTCCATGGAGCAACCCCGTGCTCCTCCCATGAAGGCTGGAGTCAATTGGAGTTCTCCCATGAAGGCTGGAGTCAATTGGAGTTCCGAATCTCCTAACTTCATGCTCAGACCTGCACCACAGATCTCAACTGGGAGAACGTACCCTAGAAAAGTTGCTGGATGA 1377 0.4328 MERYKIIKEVGDGTFGSVWRAISKQAGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKLFSESEIRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDIIKIADFGLAREINSQPPYTEYVSTRWYRAPEVLLQSYIYNAKVDMWAMGAIMAELFSLRPLFPGASEADEIYKICGVIGSPTTESWAVGLKLARDINYQFPQLAGVNLSSLIPSASDHAISLIQSLCSWDPCKRPTALEALQHPFFQSCFYIPPSLRSRAIARTPPPATRGSLDQQGVKRYPGALPNSKLTNYFPSPKLQPSSGVQRKLDMVNQDDIQNDKSMKTTTQLKYRQPGKDSQTSINKGRSTRGALETAERLANMSIGTRRQSMEQPRAPPMKAGVNWSSPMKAGVNWSSESPNFMLRPAPQISTGRTYPRKVAG* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3216 458 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Psa2g3216 458 CDD STKc_MAK_like 4 283 - -
Psa2g3216 458 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3216 458 MobiDBLite consensus disorder prediction 326 346 - -
Psa2g3216 458 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 1 415 - -
Psa2g3216 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Psa2g3216 458 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3216 458 MobiDBLite consensus disorder prediction 353 385 - -
Psa2g3216 458 MobiDBLite consensus disorder prediction 323 387 - -
Psa2g3216 458 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g3216 458 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 415 - -
Psa2g3216 458 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Psa2g3216 458 Gene3D Transferase(Phosphotransferase) domain 1 83 288 - -
Psa2g3216 458 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3216 Psa-Chr2 367393591 367400402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3216 1 290 Core Cell Cycle Gene Families AT3G48750 37.248 8.25e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Psa2g3216 Pkinase 1.6e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3216 K08829 - gmx:100810150 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3216 2 367393591 367400402 Psa2g3216 2 367393591 367400402 ECH