Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3214 ATGTTTGAATGCATAAGATGTAGTAATAGGAAGCAGACGGCGGAAGATAAGGAGGATGAAGAGGTCGGTCAGAGTAAAGAAGCCGTCAAAAGCCTGACTGCGCAGATAAAAGATATAGTACTTAAGTTTACAGGTGCTTCCTGCAAACGATCCAGCTCCTACAGAAAAGGACTGAGATCTTCTCCAAACTCGGTAGAGAACTCAGAAAGGGTTCAATATCCTTATATGGGAGGTGCAACCTCAGGTTCTACTCCTCCTTGGGAGTTACGTGGAAACTACAGGAATGGCAACCAAACTCCTAGAGTGCAAGAGCCGGTTGTGGCAGAACCTGAAGCAGTGGTGGAGGAAGAGATTGGAAACAAAGTTTGGGTGGCACAGGTGGAGCCGGGGATTGATGTTACCTTTCTGTCTCTTCCTGATGGTGGAAATGATCTCAGAAGAATTCGATTCAACCGAGAAATGTTTGATAAATGGCAAGCTCAAGTATGGTGGGGAGAGAATTATGACAGAATCAGGGAGCTATATAATGTCCAGAGATTTAATCGTCAAGCTCTCAACACTCCTCCACCGTCCGAGGATGAGCAGAGAGATTCTTCTGACCCAAGGCATCACCAAACTGCAAGAGATAGCCCTGTGGCTGCATGGTTGAACAATGATTCAATGCTGAGGAATCAGAATTATAGTCCTTCGGATTACACTATGGGTCAAGGAAGCAGTAGCAACCAAGAAATGCATGCAACAGGGTCATCCATGGAAGCATCAAGAGCCTCTTCTAAAGATGAGCTGGTTTTCAGCAATGCAGTTGGAGTTGAGTCCGAATGGATTGAGCAAGTTGAGTCTGGTGTGTTTGTTACTATCAGGCGGTTACCTGATGGAAACAAGGAGCTTCGCCGTATCAGATTCAGCCGACAGAGGTTTGGAGATGAAGATGCAAGGAAATGGTGGGAAGAGAACAGAGAAAGAGTTCAAGTTCAATACATATGA 984 0.4543 MFECIRCSNRKQTAEDKEDEEVGQSKEAVKSLTAQIKDIVLKFTGASCKRSSSYRKGLRSSPNSVENSERVQYPYMGGATSGSTPPWELRGNYRNGNQTPRVQEPVVAEPEAVVEEEIGNKVWVAQVEPGIDVTFLSLPDGGNDLRRIRFNREMFDKWQAQVWWGENYDRIRELYNVQRFNRQALNTPPPSEDEQRDSSDPRHHQTARDSPVAAWLNNDSMLRNQNYSPSDYTMGQGSSSNQEMHATGSSMEASRASSKDELVFSNAVGVESEWIEQVESGVFVTIRRLPDGNKELRRIRFSRQRFGDEDARKWWEENRERVQVQYI* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3214 327 ProSiteProfiles BRX domain profile. 272 327 IPR013591 -
Psa2g3214 327 ProSiteProfiles BRX domain profile. 121 176 IPR013591 -
Psa2g3214 327 MobiDBLite consensus disorder prediction 1 27 - -
Psa2g3214 327 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 327 - -
Psa2g3214 327 MobiDBLite consensus disorder prediction 232 258 - -
Psa2g3214 327 Pfam Transcription factor regulating root and shoot growth via Pin3 122 175 IPR013591 -
Psa2g3214 327 Pfam Transcription factor regulating root and shoot growth via Pin3 271 326 IPR013591 -
Psa2g3214 327 Pfam Transcription factor BRX N-terminal domain 26 48 IPR027988 -
Psa2g3214 327 MobiDBLite consensus disorder prediction 193 207 - -
Psa2g3214 327 MobiDBLite consensus disorder prediction 9 26 - -
Psa2g3214 327 MobiDBLite consensus disorder prediction 182 215 - -
Psa2g3214 327 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 327 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3214 Psa-Chr2 367333845 367337960 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3214 1 327 Major Intrinsic Protein MIP AT1G31880 46.893 4.98e-93 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3214 - - mtr:MTR_5g026970 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3214 2 367333845 367337960 Psa2g3214 2 367333845 367337960 ECH