Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3210 ATGGCTGCTCTAACCTCTCTCTTTAAAATGGTGAACATACCTAACAAAGGTAGAGCCCTTATTGCAGCACAAGATCTCAAAGCTGGCCAAACAATCATCACTGAATCCCCTCTCCTTCTCTTCTCAGCATCACCTCTCTTCTCTCCTTCACCTTCCCCTTACTGTCACCACTGCTTCAGAACCCTACCACCTTCACAAACATTTTCATGTCCTTCTTGCTCAAACTACATTTTCTGCAGCCAAAAGTGTCTCTCTATTTCCCTCAACTCCTCTCACTCTTCTTGGACATGTCAAACACTCTCTCATCTTCAAAACCCCGCTTCACCTTTATCAGAAAAATCTTCTCAACTCCAAGTTCAAGCTCGTTTAATTGTTGCTGCTTACAATCTTGCTATTCACACTCCTTCAAATCTTGAGACTTTACTTTCTCTTCATAGTGTTCCGAATTATGATAAAAGTGATGCTATATTTGGTCCTGCTAACTTCATTCATTCTCTTATCTCACCTTTTTGTCCACCTCACATGAACTTTTCGCCAGAACTAGCAGCTAAAGTCATTGCAATAGAAAGAGCAAACTCTTTTAGCTTAATGGAACCTTATTCGCCAAATGGGCCTCAAAGATCCATTAAGGCTTATGGAATTTACCCAATTACCACTATTTTTAACCATGATTGTATTCCTAATGCATGCAGGTTTGATTACGTGGAAAAGGATGAACATAATACTGATATTGTTATTAGGTTGATTAAGGATGTTGATGCTGGAAGTGAGATCTGCATAAGCTACCAAAGGATTAATAAGGATTACTCAACGAGGAAAAGAATCTTGATGGAGGATTTTGGTTTTGTTTGTGAATGTGATAGGTGTAAGATTGAAGCAAATTGGAATGAGGGGGAGAACAAGGACAGTGATCTGCCACATAAGATTTTCTTGTCCAAGTTTGTTTGTGATAAGGTGAATTGTTCAGGAACTTTGGCTCCTCTACCTCCAAAAGATGGTGAAAAATGTAATGTTCTTGAGTGTAACTTTTGTGGTAATTTGAAAGTTGACTCTACCACTTAA 1062 0.3889 MAALTSLFKMVNIPNKGRALIAAQDLKAGQTIITESPLLLFSASPLFSPSPSPYCHHCFRTLPPSQTFSCPSCSNYIFCSQKCLSISLNSSHSSWTCQTLSHLQNPASPLSEKSSQLQVQARLIVAAYNLAIHTPSNLETLLSLHSVPNYDKSDAIFGPANFIHSLISPFCPPHMNFSPELAAKVIAIERANSFSLMEPYSPNGPQRSIKAYGIYPITTIFNHDCIPNACRFDYVEKDEHNTDIVIRLIKDVDAGSEICISYQRINKDYSTRKRILMEDFGFVCECDRCKIEANWNEGENKDSDLPHKIFLSKFVCDKVNCSGTLAPLPPKDGEKCNVLECNFCGNLKVDSTT* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3210 353 ProSiteProfiles SET domain profile. 6 263 IPR001214 GO:0005515
Psa2g3210 353 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 351 IPR044238 -
Psa2g3210 353 Gene3D - 54 111 - -
Psa2g3210 353 CDD SET_SMYD 186 289 - -
Psa2g3210 353 SUPERFAMILY SET domain 8 285 IPR046341 -
Psa2g3210 353 Gene3D SET domain 19 290 IPR046341 -
Psa2g3210 353 SMART set_7 6 269 IPR001214 GO:0005515
Psa2g3210 353 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 1 351 - -
Psa2g3210 353 Pfam SET domain 17 262 IPR001214 GO:0005515
Psa2g3210 353 Gene3D - 112 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3210 Psa-Chr2 367238226 367239815 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Psa2g3210 SET 1.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3210 - - cam:101515628 479.944