Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3207 ATGAGCGTTCCACCACCGCCGCCGCTGATGTGGCCACCAACTCATCCACCGTTCACGGTGTCTCAGTGGCAGGAGCTTGAACACCAAGCTCTCATCTTCAAGTATCTCAAAGCTGGTTTGTCGGTTCCTCCAGACCTCCTTTTACCTATTCGGAAAAGTCTTCAATTGATGTCTCACCCATCTCTGGGTTATTATGGGAAGAAAATTGACCCAGAACCAGGTAGGTGTAGAAGAACCGATGGAAAAAAATGGAGATGTTCTAGGGATGCTCATCCTGATTCTAAGTACTGTGACCGCCATATGATACGACGTCGTTACCGTTCAAGAAAGCCTGTGGAATCTTCTTCTTCTTCTCAATCTCAATCTCAATCTTCATCTTCACTTTCTTCTACTTCGCAACAACTTGCTCCTTCTATTGGTGCTACTACTACTGTTTCTGCCACTGATACTTCAACTTTCCATACACTTCCTTTGCATACAAATGGTACTCGTGAAACTTTAGGTTTCACTCTTGGGAACACCATGTCCCACATGGACCCTATGCTTCTTCCTCTTCAGGGTTCTAAGAAACCTTATAGGTATGGACTGAACTCGGAAGCAGAGGAGCACAACCTCTTACAGAAAGATCTCGGAACTGTCAAGTATCAAGGCTACGACTTTACATCAGATGGCATGTGGTATAACAACATGTCTCAGATTCCATCAAACACAGTTTCAGAATCAAGGAGCAATTCTACCATGGTTAACAACAGCAACTACTTTCAACAACAGCGAACAACACGCGAGCCCGAGCTGCTGTTTAACCTCGACGCTGCAAGGTCCAAGGAAATCGTCTTCAACGGCCAGTTAGGTAGTTTGAAACAGGACTATCAATCCCCTCAGTCTCTCTTCAATGACTGGCAGTGGAAGAAAGATTTAGCCTCGTCTGCCATGGAGTATAGACCAAGCAAGGATTTTAACACCAACCCAGATATGAATGCCGATTCAAATGCTACTCTATGA 1002 0.4491 MSVPPPPPLMWPPTHPPFTVSQWQELEHQALIFKYLKAGLSVPPDLLLPIRKSLQLMSHPSLGYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVESSSSSQSQSQSSSSLSSTSQQLAPSIGATTTVSATDTSTFHTLPLHTNGTRETLGFTLGNTMSHMDPMLLPLQGSKKPYRYGLNSEAEEHNLLQKDLGTVKYQGYDFTSDGMWYNNMSQIPSNTVSESRSNSTMVNNSNYFQQQRTTREPELLFNLDAARSKEIVFNGQLGSLKQDYQSPQSLFNDWQWKKDLASSAMEYRPSKDFNTNPDMNADSNATL* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3207 333 MobiDBLite consensus disorder prediction 314 333 - -
Psa2g3207 333 Pfam QLQ 17 51 IPR014978 GO:0005524|GO:0005634|GO:0006355
Psa2g3207 333 ProSiteProfiles QLQ domain profile. 17 52 IPR014978 GO:0005524|GO:0005634|GO:0006355
Psa2g3207 333 ProSiteProfiles WRC domain profile. 70 114 IPR014977 -
Psa2g3207 333 MobiDBLite consensus disorder prediction 112 144 - -
Psa2g3207 333 PANTHER - 1 330 IPR031137 GO:0005634|GO:0006351|GO:0032502
Psa2g3207 333 Pfam WRC 71 113 IPR014977 -
Psa2g3207 333 PANTHER GROWTH-REGULATING FACTOR 1 330 - -
Psa2g3207 333 MobiDBLite consensus disorder prediction 97 144 - -
Psa2g3207 333 SMART QLQ_2 16 52 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3207 Psa-Chr2 366875867 366878669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3207 16 113 GRF Transcription Factor Family AT3G13960 59.091 4.17e-40 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Psa2g3207 WRC 2.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3207 - - lja:Lj2g3v1537380.1 432.565