Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3193 ATGATGGAGAGTGGTGAGATAGGAGGAAGAGAAGGTTACAATGGAGTGATGATGGCGATGACAAGAGACCCGAAGCCGAGGCTGAGGTGGACAGCCGATCTTCACGACCGGTTTGTCGATGCTGTCACAAAGCTTGGTGGCCCTGACAAGGCAACTCCAAAAGCTGTTCTAAGGTTAATGGGCTTAAAAGGTTTGACATTATACCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAACACGGTCGAAAACAATATGAAGAACAATACAAAGAGAATAGCAGGTGCTCCTATGTAAATTTCAGTAATCATTCTTCACATACTAATCCCAGTTATGGAGGTGATAATGATGAGGGGGAAATCCCAATAGCTGAAGCACTTAAGCAACAAATTGAAGTTCAAAAGAGATTAGAAGAGCAATTTGAGGTACAAAAGAAATTGCAAATGAGAATAGAGGCTCAAGAGAAGTATTTTCAGACAGTGTTAGAGAAAGCACAAACAAGTCTTTCACAAGATGGACAAACCAATCTTGAATTCAACTCAGCTTTATCAAATTATTTCATGGAAAATATGAACAAAGATGGTAAAGAAAACATAGTAGACATGAATGAGTTTTATAACAAGAATCATAGTTCAGTTTTCAATTATCAAGAAATACTAGGAGTTGAAGAAAATAAGGAACTAAAGGCTCAAGTTGAAGGGGATTCAGTTCAGCTAGACTTGAACATTAAAAATGGCAATGAACTTCTATGTGCAGATGGAGCTGAAATGGAATCAAAGATGGTTTCATATAGGGTGTTCCAATTTTGA 813 0.3788 MMESGEIGGREGYNGVMMAMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKAVLRLMGLKGLTLYHLKSHLQKYRLGQHGRKQYEEQYKENSRCSYVNFSNHSSHTNPSYGGDNDEGEIPIAEALKQQIEVQKRLEEQFEVQKKLQMRIEAQEKYFQTVLEKAQTSLSQDGQTNLEFNSALSNYFMENMNKDGKENIVDMNEFYNKNHSSVFNYQEILGVEENKELKAQVEGDSVQLDLNIKNGNELLCADGAEMESKMVSYRVFQF* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3193 270 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 251 IPR044848 GO:0003700
Psa2g3193 270 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 251 - -
Psa2g3193 270 Gene3D - 24 82 - -
Psa2g3193 270 Pfam MYB-CC type transfactor, LHEQLE motif 123 168 IPR025756 -
Psa2g3193 270 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 25 80 IPR006447 GO:0003677
Psa2g3193 270 Pfam Myb-like DNA-binding domain 28 78 IPR001005 -
Psa2g3193 270 SUPERFAMILY Homeodomain-like 25 81 IPR009057 -
Psa2g3193 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 82 IPR017930 -
Psa2g3193 270 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3193 Psa-Chr2 365792895 365795312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3193 18 166 G2-like Transcription Factor Family AT4G13640 53.947 7.20e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Psa2g3193 Myb_DNA-binding 1.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3193 - - gmx:100819756 378.252