Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3188 ATGGCAGCTTGCACTGTCTACTCAACACAAACTCTAAGAACAAACATCTCAATTCCAACATCATCAAAAACAAACGTTGGACTCCATCAAAAACAAGTACTTTTCTTCACAACAAACCAGAAAAACAACAGCAGAAGAACAAACAGCAACAAAAGATACTTGATAACATGTGGAGCAGGTGACTCACAGACAATTGTGATTGGTCTAGCAGCCGATTCCGGTTGTGGTAAAAGTACTTTCATGAGAAGACTCACAAGTGTTTTTGGAGGAGCAGCAGAGCCACCAAAAGGTGGTAATCCTGATTCTAACACACTTATCAGTGACACAACAACTGTCATATGTTTGGATGATTATCATTCTTTGGATAGAACCGGTAGAAAAGAGAAAGGTGTTACTGCACTTGATCCAAAAGCTAATGATTTTGATCTCATGTATGAACAAGTTAAAGCTATTAAAGATGGAAAATCTGTTCAAAAACCTATTTATAATCATGTTACTGGTCTTTTGGATGCTCCTGAGCTTATTAAACCTCCCAAAATCTTAGTCATTGAAGGTCTTCATCCAATGTATGATTCTAGAGTTAGAGAACTCTTGGACTTCAGTATCTACTTAGACATTAGTAATGAGGTGAAATTTGCTTGGAAAATTCAGAGAGACATGGCAGAACGTGGACACAGTCTTGAAAGTATCAAGGCTAGCATTGAAGCAAGGAAGCCTGATTTTGAAGCTTATATTGATCCACAAAAGCAATATGCAGATGCAGTGATAGAAGTATTACCAACTCAACTCATCCCCGATGATAACGAGGGAAAGATTTTACGAGTGAGGTTGATACAGAAAGAGGGTGTTAAATACTTTAGCCCAGTTTACTTGTTCGACGAAGGTTCAACAATTTCATGGATACCATGTGGAAGAAAACTCACATGCTCTTATCCCGGAATCAAGTTCTTCTACGGACCAGAAACATACAAAGGAAACGAGGTGTCAGTTGTGGAAATGGACGGACAATTCGACAGACTAGATGAACTGATATATGTTGAGAGCCATTTAAGCAACTTATCATCCAAATTCTATGGAGAAGTTACTCAACAGATGTTGAAGCATGCTGATTTTCCTGGTAGCAACAATGGAACAGGTCTGTTTCAAACCATTGTTGGTTTGAAGATAAGAGATTTGTTTGAGCAGATAGTAGCAAGCAGGGCTGAGACTCCAGTAGGAGCTGCTAAAGCTTAG 1233 0.3885 MAACTVYSTQTLRTNISIPTSSKTNVGLHQKQVLFFTTNQKNNSRRTNSNKRYLITCGAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPKANDFDLMYEQVKAIKDGKSVQKPIYNHVTGLLDAPELIKPPKILVIEGLHPMYDSRVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFFYGPETYKGNEVSVVEMDGQFDRLDELIYVESHLSNLSSKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLFEQIVASRAETPVGAAKA* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3188 410 ProSitePatterns Phosphoribulokinase signature. 215 228 IPR006082 GO:0005524|GO:0005975|GO:0008974
Psa2g3188 410 PANTHER URIDINE KINASE 7 410 - -
Psa2g3188 410 Pfam Phosphoribulokinase / Uridine kinase family 66 264 IPR006083 GO:0005524|GO:0016301
Psa2g3188 410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 334 IPR027417 -
Psa2g3188 410 Gene3D - 61 295 IPR027417 -
Psa2g3188 410 PANTHER PHOSPHORIBULOKINASE 7 410 - -
Psa2g3188 410 CDD PRK 66 354 - -
Psa2g3188 410 PRINTS Phosphoribulokinase family signature 71 88 IPR006082 GO:0005524|GO:0005975|GO:0008974
Psa2g3188 410 PRINTS Phosphoribulokinase family signature 180 198 IPR006082 GO:0005524|GO:0005975|GO:0008974
Psa2g3188 410 PRINTS Phosphoribulokinase family signature 215 232 IPR006082 GO:0005524|GO:0005975|GO:0008974
Psa2g3188 410 PRINTS Phosphoribulokinase family signature 233 256 IPR006082 GO:0005524|GO:0005975|GO:0008974
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3188 136 256 PRT Gene Family AT3G27190 33.065 8.05e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3188 K00855 - gmx:100807126 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3188 2 365151636 365154719 Psa2g3188 2 365151636 365154719 ECH