Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3183 ATGGCAGATAGTTCAGTATCATTTTTATTGGACAAGCTAAGTTCCTTACTTCAAGAAGAAGTGAATTTACAAAGAGGGGTCCGTGAAGATGTTCAACACATCAAAGATGAACTGGAACGCCACAAAGCCATCTTGATGAAAGCGGATTCAATGGAAGACAAGGACCCTGAACTGAAAGTATGGGTTAAAAGGGTAAGAGAGATTGCTGAAGACATGGAAGATGCTATAGATGAATACAGTATTCGCCTTGTTGATCATCAACAAGGAAACAAATATCAACAAGGAAACAAATATTCTTTTATCCATAGGATGGTTTTTGGCCTCAAGACCCTGGGAGCTAGGCGCAGAATTGCATCAGATATACAAGGAATCAAATCCAAAGTTGAAGTTCTCTCTAATGAACGTCCAATCATATCTGGTGTAGGTTCAGGCTCAAGTCAAAGGCTTTCATCGAGGCTTGATAGTCAAGGTGATGCTCTTTTGTTAGAGGAAGCTGATTTAGTTGGAATTGAACAACCAAAGAAGCAAGTGTGTGATTTGCTTTTCAAAGATGAATCAAATAGAGCTGTGATTTCAATCTATGGTATGGGAGGATTAGGGAAAACAACATTGGCAAAACAAGTCTATGATGATCCAAAAGTCAAGAAACGTTTCAGGATTCATGCTTGGGTTAATCTCTCTCAATCTTACAAGATGGAAGAGTTACTCAAATACCTTTTTCAACAGCTTCATAGTGTCATTGGCAAACCAGTTCCAGAAGCAGTCGGAACGATGAAAATCGAAAAGGTGAAAGAGTCTATCAAGAACTTGCTCCAAGGAAGTAGGTATCTAATTGTGCTCGATAATGTGTGGCATGTGAATGTATGGGATGCTGTGAGGCTTGCTTTGCCTAATAACAACCGCGGAAGTAGAGTGATGATTACCACGCGCAACAGAGATATAGCATCGTATTCTTGTGCTGGATTTGGTAAGAATTTTCACCTTGAATTCTTACCTGAGAAAGAAGCTTGGTCACTTTTTTGTAGGAAGACATTTCAAGGTAACTCGTGTCCGCCTCATCTTGAAGAAGTTTGTAGGAAGATCTTGAAATTGTGTGGAGGGTTGCCGCTAGCAATTGTGGCAGTCAGTGGTGCTTTGGCTACTCGAGGAACGTCAAACATCGAAGAGTGGCAGATAGTTTGCAGAAGTTTTGGATCTGAAATTGATGGCAATGACAAACTGGAGGATATGAAGAAAGTACTTTCGTTAAGTTTCAACGAGTTGCCTTACTATCTTAAATCATGTCTGTTGTATTTAAGCATGTTTCCTGGACGCCATGCTATCGAGCATATGAGATTGATTCGGTTGTGGATAGCTGAAGGGTTTGTAAATGGCGAAGATGGTAAGACACTAGAGGAAGTTGCAGATAGTTACCTTAAGGAGCTTTTGAACAGAAGTTTTCTCCATGTGGTAGAAAAAACTAGTGATGGAAGGATGAAGACTTGTCGCATGCATGATCTTCTAAGAGAAATTGTCAGTTTCAAGTCAAAGGATCAGAACTTTGCAACAATAGCAGGAGATCAAGAATTGGTATGGCCGGAACGAGTTCGTCGTTTATCGGTCATAAATTCGTCATATGATGTACTTAGACAGAATAAGACCAGATTCAAACTTAGGTCTCTGCTAATGTTTGCATTTCCAGACTCACTCAATCTTTTCTCTCTCCATGAATTATGCTCCTACACTGGTGTTAAGTTACTCAGGGTGTTAGATTTGAAGGACTCGCCTTTGGAGGATTTTCCTGCTGAAATTGTCAATCTTTACCTTCTGAAGTATCTAAGTTTGAAGAATACAAAGGTGAAAAGCATTCCAGGTTCCATTAAGAAGCTGCAAAACTTGGAGACATTGAATCTTAAACACACTTATGTCACTGAATTGCCTGTTGAAATTGCGGAGCTGAAACGACTACGCCATCTCCTCGTGTATCGTTACGAGATTGAATCCTATGCTCATTTCCACCTAAGGCATGGATTCAAAGTGGCTGCACCTATAGGAAACATGTTATCTTTACAAAAGCTTTGTTTCATAGAGGTAGATCAAGGAAGTGGAGCATTGATGGTTGAGCTTGGAAAACTCACTCAACTTAGGAGGCTAGGCATTAGAAAAATGAGGAAAGAAGACGGTCCCGCTTTGTGTTCAGCTATTGAGAAAATGATCCATCTTAGATCATTGTCCATAACTGCAATAAACGAAGACGAGATAATCGATATTCACAACATCTCAAAGCCTCCTCAGTATCTTCAGCAGCTATACTTGAGCGGTCGTTTAGAGAAGTTTCCACAATGGATAAACTCTCTCAAGAACTTGTTCCGAGTTTTCTTAAAATGGAGCAGGTTAAAGGAGGACCCTCTTCAGTATCTTCAAAACTTGCCAAATCTTCGACATCTTGAGTTTCTTCAAGTATACATTGGCGAGAAATTGCATTTCAAAGCAGACGGGTTTCCAAATCTAAAAGTTTTAGGCCTCGACGATTTAAAAGGACTGAACTCTATGACAATCGAGGAGGGAGCAATGCAAGGTCTTAAGAAGTTGGTCATCCAACGCTGCGGTTCATTCAAGATTGTACCATTAGGCATTGAACACTTAACTAAGCTAAAAACAATCGAGTTCTTTGATATGCCCGATGAATTGATTACGGCTCTTCGTCCAAACGGAGGGGAAGATTACTGGAGAGTACAACATGTTCCAACGGTTTATTCGACATACTGGAGGGATGGTGGTTGGGATGTTTATTCATTAGAGACTTTTGGGGAGAGAGTGACTGATTCCAATCATAGTACTGCAAAGAGGACTCTTGAGCCTCCTACTCTTTGGAAGGTTTAA 2862 0.4032 MADSSVSFLLDKLSSLLQEEVNLQRGVREDVQHIKDELERHKAILMKADSMEDKDPELKVWVKRVREIAEDMEDAIDEYSIRLVDHQQGNKYQQGNKYSFIHRMVFGLKTLGARRRIASDIQGIKSKVEVLSNERPIISGVGSGSSQRLSSRLDSQGDALLLEEADLVGIEQPKKQVCDLLFKDESNRAVISIYGMGGLGKTTLAKQVYDDPKVKKRFRIHAWVNLSQSYKMEELLKYLFQQLHSVIGKPVPEAVGTMKIEKVKESIKNLLQGSRYLIVLDNVWHVNVWDAVRLALPNNNRGSRVMITTRNRDIASYSCAGFGKNFHLEFLPEKEAWSLFCRKTFQGNSCPPHLEEVCRKILKLCGGLPLAIVAVSGALATRGTSNIEEWQIVCRSFGSEIDGNDKLEDMKKVLSLSFNELPYYLKSCLLYLSMFPGRHAIEHMRLIRLWIAEGFVNGEDGKTLEEVADSYLKELLNRSFLHVVEKTSDGRMKTCRMHDLLREIVSFKSKDQNFATIAGDQELVWPERVRRLSVINSSYDVLRQNKTRFKLRSLLMFAFPDSLNLFSLHELCSYTGVKLLRVLDLKDSPLEDFPAEIVNLYLLKYLSLKNTKVKSIPGSIKKLQNLETLNLKHTYVTELPVEIAELKRLRHLLVYRYEIESYAHFHLRHGFKVAAPIGNMLSLQKLCFIEVDQGSGALMVELGKLTQLRRLGIRKMRKEDGPALCSAIEKMIHLRSLSITAINEDEIIDIHNISKPPQYLQQLYLSGRLEKFPQWINSLKNLFRVFLKWSRLKEDPLQYLQNLPNLRHLEFLQVYIGEKLHFKADGFPNLKVLGLDDLKGLNSMTIEEGAMQGLKKLVIQRCGSFKIVPLGIEHLTKLKTIEFFDMPDELITALRPNGGEDYWRVQHVPTVYSTYWRDGGWDVYSLETFGERVTDSNHSTAKRTLEPPTLWKV* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3183 953 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 432 IPR027417 -
Psa2g3183 953 Gene3D - 5 118 - -
Psa2g3183 953 PRINTS Disease resistance protein signature 190 205 - -
Psa2g3183 953 PRINTS Disease resistance protein signature 270 284 - -
Psa2g3183 953 PRINTS Disease resistance protein signature 365 379 - -
Psa2g3183 953 PRINTS Disease resistance protein signature 621 637 - -
Psa2g3183 953 CDD RX-CC_like 2 133 IPR038005 -
Psa2g3183 953 Gene3D - 330 417 IPR042197 -
Psa2g3183 953 SUPERFAMILY L domain-like 496 888 - -
Psa2g3183 953 Pfam NB-ARC domain 171 419 IPR002182 GO:0043531
Psa2g3183 953 Gene3D - 418 508 IPR036388 -
Psa2g3183 953 Gene3D - 156 320 IPR027417 -
Psa2g3183 953 Coils Coil 62 82 - -
Psa2g3183 953 Gene3D Ribonuclease Inhibitor 511 893 IPR032675 -
Psa2g3183 953 PANTHER DISEASE RESISTANCE PROTEIN RP 1 139 IPR044974 GO:0006952
Psa2g3183 953 PANTHER DISEASE RESISTANCE PROTEIN RP 160 915 IPR044974 GO:0006952
Psa2g3183 953 Pfam Rx N-terminal domain 6 90 IPR041118 -
Psa2g3183 953 PANTHER OS08G0539900 PROTEIN 160 915 - -
Psa2g3183 953 PANTHER OS08G0539900 PROTEIN 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3183 Psa-Chr2 364691984 364696011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3183 190 372 WRKY Transcription Factor Family AT5G45050 27.174 6.35e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3183 K13457 - gmx:100305458 1429.46