Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3164 ATGGCTTCTAACTCCAACTCCAAAGTGCCACAAAACACCATCACTCACCCTCCTTGGTATTCATCAAAAACTGGAATTTACAATAGTACTCATTCTCCTAGGAACCTTCCAACCGACCCTTTTCTCGATGTTGTTTCCTTCATTTTTTCTCACCCTCATGATGGAGTTATGGCTCTTATTGATTCCTTATCCGGGTCTTCCATTGCTTACTCCAACTTGTTTCCTTTAGTCAAATCCATGGCTTCTGGTCTTCGTAAAATGGGTGTTTCACAAGGTGATGTTGTTCTGCTTTTACTTCCCAATTCAATCTACTATCCCATTGTACTATTGGGTGTAATATATCTAGGTGCTGTTGTTGCACCATTGAATCCTCTTAGCAGTGTTGCTGAAATTCAAACTGGATATTTATATTTATGCGATCGTATGAAAGACATGATCAAATTCAAGGGCCATCAGATTGCTCCTGCTGATTTAGAAGGTGTGTTAATTTTGCATCCTGAAATTGTTGATGTTGCCGTGGTAGGTTTCAAGGATGAAGAAGCTGGAGAGATTCCGGTAGCATTTGTGGTCAAGAAAGTTGGAAGTGTACTTTCCATGAAGAATGTTATCGATCATGTTGCAGAGCAGGTTGCTCCATACAAGAAAGTTCGGAAAGTCGTCTTCACCGACAAGATACCGAGGTCTATAACTGGAAAGATTCTTCGAAGGCAACTCGGGAATGACTTGTCTGCTTAA 735 0.4082 MASNSNSKVPQNTITHPPWYSSKTGIYNSTHSPRNLPTDPFLDVVSFIFSHPHDGVMALIDSLSGSSIAYSNLFPLVKSMASGLRKMGVSQGDVVLLLLPNSIYYPIVLLGVIYLGAVVAPLNPLSSVAEIQTGYLYLCDRMKDMIKFKGHQIAPADLEGVLILHPEIVDVAVVGFKDEEAGEIPVAFVVKKVGSVLSMKNVIDHVAEQVAPYKKVRKVVFTDKIPRSITGKILRRQLGNDLSA* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3164 244 Pfam AMP-binding enzyme 57 132 IPR000873 -
Psa2g3164 244 Pfam AMP-binding enzyme C-terminal domain 158 232 IPR025110 -
Psa2g3164 244 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 13 132 - -
Psa2g3164 244 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 133 239 - -
Psa2g3164 244 Gene3D - 142 243 IPR045851 -
Psa2g3164 244 Gene3D - 70 132 - -
Psa2g3164 244 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 132 - -
Psa2g3164 244 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 133 239 - -
Psa2g3164 244 SUPERFAMILY Acetyl-CoA synthetase-like 134 239 - -
Psa2g3164 244 SUPERFAMILY Acetyl-CoA synthetase-like 53 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3164 Psa-Chr2 363632613 363633812 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3164 132 243 Monolignol Biosynthesis Gene Families AT4G19010 58.036 4.03e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3164 K01904 - gmx:100804808 183.341