Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3142 ATGGAGCTATTTCCAGCACAACCAGATTTATCTTTGCAAATTAGTCCTCCAAACACAAAACCAACATCAAGTAATTGGAAGAGAACAACATCATCAACAACAACAACAACTGAAGAAGAAATGGATTTGGGGTTTTGGAAAAGAGCTTTGGATTCAAGAAACTCTTTATCATCATCATCATCATCATCAATGGCTACTACAACTACTTCTACAAAAACTCATGATAATTACACTTTTGACCTCGCTCTTTCAAATCCAACAAAGCCTTTAGATTCAAACAACACTTCCTCCAATAACCTCATTCATCACCACTTTCAAAATAATGGTAACAACAACAATAATGCAATTGCAAACCCTTTTCAATCTTTTCAACAAAACCATTACTTTCAACACCCCCAACCTTTCTTTCAACACCACCACCCCCAACAACAACACCACCATAACCAAACCTTGAGTCAAGAACTTGGTTTTCTTAGACCTATTAGAGGAATTCCTGTTTATCAAAACCCTCCTCCTTTATCATTCCCTCAACTTCATAATCATAACCATAATCTTAATCATAACCTTAACCATAACCTTAATCATCTTCATGTTCTTGATGGCTCTACTACTACTACCACACCTTCTTCTTTTTCTAACGCAAACACAAACTCAACCCCTTTTCAATCTCAAGCTTTGATGAGGTCAAGATTCTTGTCTAGATTTCCTGCAAAAAGAAGCATGAGAGCTCCAAGGATGCGTTGGACTACTACACTTCATGCTCGATTTGTTCATGCTGTTGAACTCTTAGGTGGCCATGAAAGAGCAACTCCAAAATCAGTACTTGAGCTAATGGATGTGAAGGATCTAACATTAGCACATGTTAAGTCTCATTTACAGATGTATCGGACGGTGAAAACTACAGATAGAGTAGGGGCTTCATCAGGGCAATCCGATGTATACGATAATGGATCGTCTGGAGATAACTCGGATGATATAATGTTTGACATCAATTCTTCAAGAAGATCATCTGATTTATCCACTAAGCAGCAAGGAAGATCGAGTGTTAATCAAGATAAGGAATGTTATGGTCTTTGGAGCAACTCATCCCGGGAAGCTTGGTTACATGGTAAACCAAAGGTTGATTCTATTGGAAACATGCAATCTCTTGAGAAGGAAATGGATGCAAAGTGTTTAAGCTATGAGAGAATATCAGATGGAAGTTCATCTACAAACCTATCAGGATCAAGTCCAAAGAAACCTAATTTGGATTTGGAATTCACCTTAGGGCAACCTCTTTGA 1281 0.3786 MELFPAQPDLSLQISPPNTKPTSSNWKRTTSSTTTTTEEEMDLGFWKRALDSRNSLSSSSSSSMATTTTSTKTHDNYTFDLALSNPTKPLDSNNTSSNNLIHHHFQNNGNNNNNAIANPFQSFQQNHYFQHPQPFFQHHHPQQQHHHNQTLSQELGFLRPIRGIPVYQNPPPLSFPQLHNHNHNLNHNLNHNLNHLHVLDGSTTTTTPSSFSNANTNSTPFQSQALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRVGASSGQSDVYDNGSSGDNSDDIMFDINSSRRSSDLSTKQQGRSSVNQDKECYGLWSNSSREAWLHGKPKVDSIGNMQSLEKEMDAKCLSYERISDGSSSTNLSGSSPKKPNLDLEFTLGQPL* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3142 426 MobiDBLite consensus disorder prediction 11 40 - -
Psa2g3142 426 Pfam Myb-like DNA-binding domain 245 296 IPR001005 -
Psa2g3142 426 MobiDBLite consensus disorder prediction 399 414 - -
Psa2g3142 426 MobiDBLite consensus disorder prediction 1 43 - -
Psa2g3142 426 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 425 IPR044847 GO:0000976|GO:0006355|GO:0010158
Psa2g3142 426 MobiDBLite consensus disorder prediction 399 426 - -
Psa2g3142 426 Gene3D - 243 300 - -
Psa2g3142 426 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 425 - -
Psa2g3142 426 SUPERFAMILY Homeodomain-like 241 297 IPR009057 -
Psa2g3142 426 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 244 297 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3142 Psa-Chr2 362093892 362099349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3142 87 425 G2-like Transcription Factor Family AT4G17695 40.282 3.50e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Psa2g3142 Myb_DNA-binding 2.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3142 - - aprc:113868756 477.633