LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa2g3130	ATGTTAAAATCAATTTTGGGTGATCCAAATGTTATGGTATTGATCAATATGAACACTCAAGGCGAGCCAAAAACCAACCCTAAAGAATGTTGTTCCATCATACTGGAGGAGGTTCTCTGTGTTCAACTTTTCCCTCTTACCAAACGAGCTGCTACACACAGCTGTTCGCCTGTTGGGTGGATGCTACAGGCTATAGACATTCCAATGAGCAACGCATCAAACAGCGCGGAGATCAACAAATATTTGTTATTGCTGATTGTTGGTGATAATGTTGGTGATATGCCGCACTCCCATCTACCTTCACCATCTCAATTTTGGAGAGCAAAAGTTGTCAAGAACTGGCAGCTATTCTTGTGTGTTTCTGTTGGTCTTGGCAGGGCTTATCATGGATTTGTTACTGAATACTATACCAGCATGCATACAGGATTACATTTTCTTTCTGAATTTTGCAGCCCTGTGCAAGATGTTGCTGATTCCTGCAGGACTGTTTTGCTGCTATGTATTGTGTGCTGTTGTGCTGCACTTGGAATGTTGAGTACTATAGCAACCGGATTAGCCATCGATGCATATGGTCCAATCAGTGACAATGCGAGAAACACAACTGCTGCCATTGGAAAGGGGTTTGCTATTGGTTCTGCCGCCCTTTGTGCTTTGGCCCTTTTTGGTGCCTTTGTGAGCCGTGCTGGTGTTACAACCGCGATGTCCTGA	708	0.4407	MLKSILGDPNVMVLINMNTQGEPKTNPKECCSIILEEVLCVQLFPLTKRAATHSCSPVGWMLQAIDIPMSNASNSAEINKYLLLLIVGDNVGDMPHSHLPSPSQFWRAKVVKNWQLFLCVSVGLGRAYHGFVTEYYTSMHTGLHFLSEFCSPVQDVADSCRTVLLLCIVCCCAALGMLSTIATGLAIDAYGPISDNARNTTAAIGKGFAIGSAALCALALFGAFVSRAGVTTAMS*	236

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa2g3130	235	PANTHER	BNAC06G40530D PROTEIN	104	163	-	-
	Psa2g3130	235	PANTHER	BNAC06G40530D PROTEIN	171	197	-	-
	Psa2g3130	235	PANTHER	BNAC06G40530D PROTEIN	195	232	-	-
	Psa2g3130	235	Pfam	Inorganic H+ pyrophosphatase	199	228	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Psa2g3130	235	PANTHER	K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP	104	163	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Psa2g3130	235	PANTHER	K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP	195	232	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Psa2g3130	235	PANTHER	K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP	171	197	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa2g3130	Psa-Chr2	358496036	358498221	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa2g3130	104	232	Primary Pumps ATPases	AT1G15690	50.270	1.07e-36	134

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa2g3130	K23025		-	cit:102578049	134.806