Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3104 ATGGCTCCTTCTTTTGATATAACTTCTCACACTGTTTGTGTTATGGATGCTTCAGGTCAATTGGGCTTTAGTCTTGTTCAAAGACTTCTTCAAAGAGGCTACACCGTTCATGCCTCCATTCAAAAATATGGAGAAGAAGATCTATTCAATGGAGTTTCTGCTGATTCTGATAAACTCAAGATTTTTCGATCAGACCCTTTTGATTATCATAGCATAATTGATGCTCTTAAAGGTTGCTCTGGTTTGTTCTACTCGTTTGAACCTCCTCTTGACCAACCCAATTATGATGAATATATGGCTGACGTGGAAGTTAGAGCAGCACACAACGTGCTTGAAGCTTGTGCTCAAACAGAAACAATAGATAAGGTTGTTTTTACATCCTCGGCAACTGCGGTTGTCTGGAGAGAGGATCGTAAAACCATTGAACCTGATTTGGATGAAATTCATTGGAGTGATGTCAATTTCTGTCGCAAATTTAAGTTATGGCATGGGATGTCAAAGACACTATCCGAGAAAACAGCGTTTGCATTAGCAATGGACAGAGGAGTGAACATGGTGTCTATCAATGCTGGATTATTGATGACTCATGATCTTTCCATTAAACATCCTTATTTAAGAGGAGCTGCTGAAATGTACGAGGATGGTGTCTTTGTGACCGTTGATTTAGGATTCTTGGTCGATACTCACATCTGTGTCTACGAGGATGTCTCATCCTACGGTCGTTATTTATGCTTCAATCATATTATTAACACTCAAGACGACGCCGTTCAGCTCGCGCACAAGTTAGCGCCTACTGCATCTTCTTCCTTACCCCAAAGTGGTGACCATGGAAAGAGTTTCATTGAACAGAAAATAAGCAACAAGAAGTTGAACAAATTAATGGTGGACTTTGAAGCTTAA 900 0.4011 MAPSFDITSHTVCVMDASGQLGFSLVQRLLQRGYTVHASIQKYGEEDLFNGVSADSDKLKIFRSDPFDYHSIIDALKGCSGLFYSFEPPLDQPNYDEYMADVEVRAAHNVLEACAQTETIDKVVFTSSATAVVWREDRKTIEPDLDEIHWSDVNFCRKFKLWHGMSKTLSEKTAFALAMDRGVNMVSINAGLLMTHDLSIKHPYLRGAAEMYEDGVFVTVDLGFLVDTHICVYEDVSSYGRYLCFNHIINTQDDAVQLAHKLAPTASSSLPQSGDHGKSFIEQKISNKKLNKLMVDFEA* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3104 299 Pfam NAD(P)H-binding 17 132 IPR016040 -
Psa2g3104 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 264 IPR036291 -
Psa2g3104 299 PANTHER CINNAMOYL-COA REDUCTASE-LIKE SNL6 8 298 - -
Psa2g3104 299 Gene3D - 4 299 - -
Psa2g3104 299 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 298 - -
Psa2g3104 299 CDD FR_SDR_e 12 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3104 Psa-Chr2 356075433 356078259 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3104 11 297 Monolignol Biosynthesis Gene Families AT5G58490 30.592 1.13e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3104 - - gmx:100790333 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3104 2 356075433 356078259 Psa2g3104 2 356075433 356078259 ECH