Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3100 ATGGCAATTGAAAACCAAGACAACACCTCTGTCAGAGAAATCAAACCAAAAAACAGAAGAATCATGGGTGCTGGAGGTCCTGATGAAGAGGATGACAGTAGATGGCCACCATGGTTGAAACCTTTGTTGAAAGAAAATTTCTTTGTTCAATGCAAGTTACATGCTGATTCCCACAAAAGTGAATGTAACATGTATTGTTTGGATTGTATGAATGGTCCTATATGTTCTCTCTGTCTTTCTTACCATAAAGAACATCGTTTTATTCAGATCCGAAGATCTTCATACCATGATGTGATTAGGGTGAATGAGATTCAGAAGGTATTGGACATCACTGGTGTTCAAACGTATGTTATCAACAGTGCAAGAGTTGTGTTTTTGAATGAAAGGCCTCAGCCAAGGCCGGGAAAAGGTGTCACAAACACTTGTGAAGTTTGCGAGCGTAGTCTTCTCGATTCCTTCCGGTTCTGCTCTCTCGGTTGCAAGCTCGAGATCAATGTCTTCTCATCACAGATTTTTAAGAAGGATACAACTTTCAAAAATTGGAATTTGATTTTGATTGTAGGAACATCTAAGAATTTCCAGAAGAAAAAGAAACAAATAACAGCAATGGCATCAGATTCAGAAGATTCATACAGTAGCAACAACAACATTCACAGCCGTCACAAGAAAATCAAAGTTCAAAGCTTCACACCATCAACACCTCCTCCAACTTCTGTTAATTACAGAACAGCCAAGAGAAGAAAGGGAATTCCACATAGAGCCCCATTGGGGATAGATAGTTGGTACTATTAA 792 0.3902 MAIENQDNTSVREIKPKNRRIMGAGGPDEEDDSRWPPWLKPLLKENFFVQCKLHADSHKSECNMYCLDCMNGPICSLCLSYHKEHRFIQIRRSSYHDVIRVNEIQKVLDITGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKLEINVFSSQIFKKDTTFKNWNLILIVGTSKNFQKKKKQITAMASDSEDSYSSNNNIHSRHKKIKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPLGIDSWYY* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3100 263 MobiDBLite consensus disorder prediction 10 31 - -
Psa2g3100 263 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 176 - -
Psa2g3100 263 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 186 258 - -
Psa2g3100 263 MobiDBLite consensus disorder prediction 226 240 - -
Psa2g3100 263 CDD Bbox2 51 90 - -
Psa2g3100 263 MobiDBLite consensus disorder prediction 1 31 - -
Psa2g3100 263 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 176 - -
Psa2g3100 263 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 186 258 - -
Psa2g3100 263 MobiDBLite consensus disorder prediction 222 247 - -
Psa2g3100 263 Pfam PLATZ transcription factor 91 162 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3100 Psa-Chr2 355308420 355310176 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Psa2g3100 PLATZ 4.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3100 - - gmx:100791221 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3100 2 355308420 355310176 Psa2g3100 2 355308420 355310176 ECH