Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3079 ATGGGAGATGTGGCTAAGGACCTTACTGCTGGAACTATTGGAGGGGCGGCACAACTAGTAGTTGGTCACCCATTCGACACCATAAAGGTCAAGCTTCAAAGCCAGCCTACACCACTTCCTGGCCAGGTTCCGAAATATTCCGGTGCAATTGATGCTGTCAAGAAGACAATAGCAGCTGAAGGTCCAAGTGGCTTATACAAAGGTATGGGAGCACCACTTGCTACCGTAGCCGCCTTCAATGCTGTCCTATTTACGGTTAGAGGCCAAATGGAAACATTGTTGAGATCATCTCCTGGTGATACCCTAACAATAAACCAGCAGGTTGTTTGTGGAGCTGCAGCTGGACTTTCTGTTTCCTTTCTAGCTTGTCCTACTGAACTGCTCAAGTGCAGGTTACAAGCACAGAGTGCGCTTGCTGGTTCAGGAACAGCAACATTGGCAGTGAAATACGGAGGACCAATGGATGTGGCCAGACATGTTCTCAGATCAGAAGGCGGCGTGAGGGGTCTCTTCAAAGGCTTGATTCCCACTATGGCGCGTGAAATACCTGGAAATGCAGCAATGTTCGGCGTATACGAAGCAACAAAGCAATTAATTGCAGGAGGCACCGACACCTCAAAACTTGGTAGAGGCTCTCTGATGGCTTCCGGAGGCTTGGCCGGCGCTGCTTTTTGGTGTATGGTTTATCCAACTGATGTTGTTAAGAGTGTGTTGCAAGTTGACGATTACAAAAATCCAAAATTTTCTGGTTCAATTGATGCTTTCAGAAGGATAAAAGCTACCGAGGGAATTAAAGGGCTTTATAAGGGTTTCGGTCCTGCAATGTTCAGAAGTGTTCCTGCAAATGCAGCATGTTTCTTGGCATATGAGATGACAAGATCAGCTTTGGGATGA 894 0.4709 MGDVAKDLTAGTIGGAAQLVVGHPFDTIKVKLQSQPTPLPGQVPKYSGAIDAVKKTIAAEGPSGLYKGMGAPLATVAAFNAVLFTVRGQMETLLRSSPGDTLTINQQVVCGAAAGLSVSFLACPTELLKCRLQAQSALAGSGTATLAVKYGGPMDVARHVLRSEGGVRGLFKGLIPTMAREIPGNAAMFGVYEATKQLIAGGTDTSKLGRGSLMASGGLAGAAFWCMVYPTDVVKSVLQVDDYKNPKFSGSIDAFRRIKATEGIKGLYKGFGPAMFRSVPANAACFLAYEMTRSALG* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3079 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Psa2g3079 297 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 297 - -
Psa2g3079 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Psa2g3079 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Psa2g3079 297 Pfam Mitochondrial carrier protein 102 200 IPR018108 -
Psa2g3079 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Psa2g3079 297 Gene3D Mitochondrial carrier domain 2 99 IPR023395 -
Psa2g3079 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Psa2g3079 297 Gene3D Mitochondrial carrier domain 100 297 IPR023395 -
Psa2g3079 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 297 - -
Psa2g3079 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3079 Psa-Chr2 353595587 353598764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3079 22 291 Antiporters AT1G79900 33.333 9.49e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3079 K15109 - gmx:100781634 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3079 2 353595587 353598764 Psa2g3079 2 353595587 353598764 ECH