Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3035 ATGAACACAAAACATACCAAAGGTCTTGAAACTGTGATCGACATAAAGCATAAACCTGTGAGTTTCACTGGTGGACTTGAGTTTGAGTCTCTTACTTACACGGTCGTGAAGAAGAAGAAAATCGACGGGAAGTTTTCGAAAGAAGATGTGGATTTGTTGCATGATATAACAGGTTATGCACCAAAGGGTTGTATCACTGCTGTAATGGGACCAAGTGGTGCAGGAAAATCTACTTTGTTGGATGGACTTGCTGGGAGGATTGCAAGTGGGAGTCTTAAAGGGAAAGTTTCATTGGATGGAAATAGTGTGAATGCGAGTTTGATTAAAAGAACTTCTGCTTATATTATGCAAGAAGATAGGCTTTTTCCTATGCTTACTGTCTATGAAACTTTGATGTTTGCTGCTGATTTCAGATTGGGACCTCTCTCAGTTACTGATAAAAGGCAGAGAGTTGAGAAGCTTATTGAACAGCTTGGCTTATCGTCATCTAGGAACACCTACATAGGAGATGAAGGAACAAGAGGAGTCTCGGGCGGAGAGCGTCGCAGAGTCTCGATCGGCGTAGACATAATCCATGGACCTTCACTTCTTTTCCTAGATGAACCAACTTCAGGACTAGACTCAACAAGTGCTCTTAGTGTGATTGAAAAAGTACATGACATAGCAAGAAATGGCAGCACAGTTATTCTCACAATCCACCAACCTTCATCAAGAATCCAATCACTACTTGACCATCTCATCATCCTTGCGAGAGGACAACTCATGTTTCAAGGATCATTCAAAGATGTAACTCTCCATTTGAACCGAATGGGACGGAAAGTTCCGAAAGGAGAGAATCCAATTGAGAATCTCATTGATGTGATACAAGAGTATGATCAGTGTGATGTTGTTGGTGTCGAGATGCTAGCGGAGTTTGCACGTACCGGAATGAAACCTCCTCTTTTAAGTGATATGGAGGAAATAATTTCAATCACTAACTCTAATTCTGTTGCCCCTTCGCCTTCTGTGCATAGAGGCTCTAGAAATGATGAAAAATCTCAAGACTTCTCTTATTCATCACAAATTAGTAGAAGAAGTTTGAATGATGAGTTTGATCATAGTCTTAGAAGCCCTTATAATAACACACCAAAGTCATGGAGTGCTAGTAATAGTGCAGCTTTCTTCAAATTCACACCCTCAAGACTTAAAAATGAGAACAGGGTGCAGAAGCCTTCAAGCCATGCTTCCCCTTCTCCGGGCTACTACACATACTCAAGTGAAATCCTTCCGGCTACTCCAACACCGCATAGCAGTGACTACACAGTGAATGAAAATGACTACCTCACACCGACAAATGGCTCACCGGAACATCTAGGCCCAAAGTTTGCAAATTCCTACATAGGAGAGACATGGATCCTAATACGCCGCAACTTCATAAACATTCGGCGCACCCCCGAGCTATTCTTATCAAGACTAATGGTCCTCACCTTCATGGGATTCATGATGGCCACAATGTTCCACAATCCAAAAGAAACCTTACAAGGAATCACAAACCGTCTCAGTTTCTTCATCTTCACGGTTTGTCTCTTTTTCTTCTCTTCCAATGACGCCGTCCCAGCATTCATCCAAGAGAGATTCATTTTCATACGCGAAACTTCACACAATGCCTATAGAGCTTCTTCCTACACCATAGCTAGCTTAATCACTCACATGCCGTTTCTTGCGCTCCAAGCTTTAGCCTATGCAGGCATTGTTTGGTTTGCTTTAGAACTTCGAGGCCCTTTTATATACTTCTTCCTCGTTCTCTTCATTTCTCTTCTTTCCACAAATTCGTTCGTCGTGTTTGTGAGTTCAGTTGTTCCAAACTATATCTTGGGCTATGCTGCAGTCATTGCCTTTACTGCATTATTCTTCTTGTTCTGTGGATACTTCTTGAGCAGCGAGGATATTCCGCTTTATTGGCGTTGGATGAACAAGATTTCGACTATGACGTACCCTTACGAAGGACTCTTGATGAATCAATATCAGACTAATGATACTTTTGGGATAAATGATGGTGTACCTGTTACTGGTTTTGATATATTGAATAGTCTTCATATCGGTACTGAAGAGTTCAAGAAGAGGAATAATGTGCTTATAATGTTAGGTTGGGCTGTGTTATATAGGATTTTATTTTACATTATTCTTCGTTTTGCATCAAAAAATCAAAGGTCCTAG 2196 0.4112 MNTKHTKGLETVIDIKHKPVSFTGGLEFESLTYTVVKKKKIDGKFSKEDVDLLHDITGYAPKGCITAVMGPSGAGKSTLLDGLAGRIASGSLKGKVSLDGNSVNASLIKRTSAYIMQEDRLFPMLTVYETLMFAADFRLGPLSVTDKRQRVEKLIEQLGLSSSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSALSVIEKVHDIARNGSTVILTIHQPSSRIQSLLDHLIILARGQLMFQGSFKDVTLHLNRMGRKVPKGENPIENLIDVIQEYDQCDVVGVEMLAEFARTGMKPPLLSDMEEIISITNSNSVAPSPSVHRGSRNDEKSQDFSYSSQISRRSLNDEFDHSLRSPYNNTPKSWSASNSAAFFKFTPSRLKNENRVQKPSSHASPSPGYYTYSSEILPATPTPHSSDYTVNENDYLTPTNGSPEHLGPKFANSYIGETWILIRRNFINIRRTPELFLSRLMVLTFMGFMMATMFHNPKETLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIASLITHMPFLALQALAYAGIVWFALELRGPFIYFFLVLFISLLSTNSFVVFVSSVVPNYILGYAAVIAFTALFFLFCGYFLSSEDIPLYWRWMNKISTMTYPYEGLLMNQYQTNDTFGINDGVPVTGFDILNSLHIGTEEFKKRNNVLIMLGWAVLYRILFYIILRFASKNQRS* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3035 731 Gene3D - 26 296 IPR027417 -
Psa2g3035 731 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 8 725 - -
Psa2g3035 731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 266 IPR027417 -
Psa2g3035 731 PANTHER ABC TRANSPORTER G FAMILY MEMBER 19 8 725 - -
Psa2g3035 731 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 276 IPR003439 GO:0005524
Psa2g3035 731 ProSitePatterns ABC transporters family signature. 176 190 IPR017871 GO:0005524
Psa2g3035 731 CDD ABCG_EPDR 26 258 - -
Psa2g3035 731 Pfam ABC transporter 53 204 IPR003439 GO:0005524
Psa2g3035 731 Pfam ABC-2 type transporter 463 668 IPR013525 GO:0016020|GO:0140359
Psa2g3035 731 SMART AAA_5 62 260 IPR003593 -
Psa2g3035 731 MobiDBLite consensus disorder prediction 326 357 - -
Psa2g3035 731 Pfam ABC-2 type transporter 233 291 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3035 Psa-Chr2 347734629 347737946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3035 15 290 Calmodulin-binding Proteins AT2G36910 26.855 2.03e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3035 K05681 - gmx:100804809 1136.71