Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3031 ATGAAGAAATTTCACAATAGCTGGCATTTATCCCTCTGCAGGTACTACAAAACCCAGCAATTATCTGAAAAGAGTGATGTTTTCAGCTTTGGCGTGGTTCTACTAGAAATTGTAAGTGGCCGGGAACCTCTCAACATAAAGAGACCACGAGTCGAGTGGAGCTTGGTTGAATGGGCTAAACCATATATAAGAGCATCAAAGGTGGATGAAATTGTAGATCCTGGCATCAAGGGAGGATATCATGCAGAGGCACTGTGGAGAGTGGTGGAAGTAGCACTGCAATGTCTTGAACCCTACTCAACATATAGGCCATGCATGGTTGATATTGTCCGCGAGTTGGAAGATGCTCTCATAATCGAAAACAATGCATCTGAATACATGAAATCAATTGACAGTCTCGGAGGATCCAACCGCTACTCAATTGTCATGGACAAAAGGGCGCTTCCTTCAACTACAAGTACGGCAGAATCGACCATCACAACTCAAAATGTGTCACACCCTCAACCGAGATAG 513 0.4405 MKKFHNSWHLSLCRYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVMDKRALPSTTSTAESTITTQNVSHPQPR* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3031 170 PANTHER OS07G0107800 PROTEIN-RELATED 15 131 - -
Psa2g3031 170 Pfam Protein tyrosine and serine/threonine kinase 17 113 IPR001245 GO:0004672|GO:0006468
Psa2g3031 170 PANTHER OS05G0525400 PROTEIN 15 131 - -
Psa2g3031 170 SUPERFAMILY Protein kinase-like (PK-like) 17 114 IPR011009 -
Psa2g3031 170 Gene3D Transferase(Phosphotransferase) domain 1 12 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3031 Psa-Chr2 347671766 347673064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3031 15 120 Receptor kinase-like Gene Family AT1G67720 45.283 2.63e-25 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Psa2g3031 PK_Tyr_Ser-Thr 5.6e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3031 - - gmx:100781986 285.419