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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Psa2g3019
ATGAACCTAGAAGAGAAAGTTACCATGGACTTGGTTCCTCCATCTGATCAACACCTTTGTTACGTTCGTTGCAACTTCTGTAACACTGTCCTCGCTGTTGGAATACCATGCAAGAGGCTACTAGACACTGTGACAGTAAAGTGTGGACACTGCAGCAACCTCTCTTTTCTCACAACAAGACCACCAAATTCCAAAACTCAGACTGTTGATCATACCCTCACTCTCCAGGGAATTTACAGTTGCAAAAAGGGACAACCATCGTCTTCCTCTTCTTCTTCCCCAACTACATCACCTGAGTCATTGTCCCCTAAACCACCACCATTTGTTGTCAAACCACCAGAGAAAAAGCACCGTCTGCCTTCTGCTTACAACCGTTTCATGAAAGAGGAGATACAGCGCATCAAAGCAGCGAACCCTCAGATCCCACATAGAGAAGCTTTCAGTGCTGCTGCAAAAAATTGGGCTAGGTTCATCCCTAATTCACCAACCAGTTCACTTTCTGCAACTAAACGTAACACTGAATGA
525
0.4495
MNLEEKVTMDLVPPSDQHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLTTRPPNSKTQTVDHTLTLQGIYSCKKGQPSSSSSSSPTTSPESLSPKPPPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPQIPHREAFSAAAKNWARFIPNSPTSSLSATKRNTE*
175
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Psa2g3019
174
PANTHER
PROTEIN CRABS CLAW
7
171
-
-
Psa2g3019
174
Gene3D
High mobility group box domain
106
169
IPR036910
-
Psa2g3019
174
MobiDBLite
consensus disorder prediction
81
116
-
-
Psa2g3019
174
Pfam
YABBY protein
16
157
IPR006780
GO:0007275
Psa2g3019
174
MobiDBLite
consensus disorder prediction
81
98
-
-
Psa2g3019
174
CDD
HMGB-UBF_HMG-box
118
171
-
-
Psa2g3019
174
PANTHER
PROTEIN YABBY 6-RELATED
7
171
IPR006780
GO:0007275
Psa2g3019
174
SUPERFAMILY
HMG-box
100
155
IPR036910
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Psa2g3019
Psa-Chr2
345367234
345368944
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Psa2g3019
1
168
C2C2-YABBY Transcription Factor Family
AT1G69180
66.860
6.66e-65
195
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
C2C2-YABBY
Psa2g3019
YABBY
2.3e-54
CL0114
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Psa2g3019
K25796
-
gmx:100819079
275.404
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