Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3004 ATGGCTTCGTTACCCAAACCAACTCCACTCTTGAAAGACGAACTCGACATCGTCATCCCTACGATCCGTAACCTTGATTTCCTGGAGATGTGGAGACCCTTTTTTGAACAGTATCATCTCATCATTGTTCAAGATGGTGACCCTTCTAAGGTTATCAAGGTTCCTGAAGGTTTCGATTATGAACTGTATAATCGGAATGATATCAATAGGATCTTGGGTCCTAAAGCTTCGTGTATCTCCTTCAAGGATTCGGCTTGTCGTTGCTTTGGGTATATGGTTTCGAAGAAGAAGTATATCTACACCATTGATGATGATTGCTTTGTTGCTAAAGACCCAACTGGGCATGAAATCAATGCACTTGAGCAGCACATTAAGAATCTCCTTAGTCCATCCACTCCATTTTTCTTCAACACCCTTTACGACCCATACAGAGAAGGTACTGATTTCGTCCGTGGATACCCTTTCAGTCTTCGTGAAGGTGTCCCCACTGCCGTTTCTCACGGCCTTTGGCTCAACATACCTGATTACGATGCTCCAACTCAGCTTGTCAAGCCCCATGAGAGGAACACTAGGTTTGTTGATGCTGTTCTGACCATTCCCAAAGGAAGTCTGTTCCCCATGTGCGGTATGAATCTGGCATTTAACCGTGAACTGATTGGACCTGCAATGTACTTCGGACTCATGGGTGATGGTCAGCCTATTGGACGCTACGACGATATGTGGGCTGGATGGTGCATAAAGGTTATCTGTGACCATTTGGGATATGGAGTGAAAACCGGACTACCTTACATTTGGCACAGCAAAGCAAGCAACCCATTTGTTAATCTGAAAAAGGAGTACAAAGGTATCTTCTGGCAAGAAGAGATCATTCCATTTTTCCAAGCTGCAACCCTTTCAAAAGATTGCACCTCTGTTCAGAAATGCTACATTGAACTCTCCAAGCAAGTCAAGGAGAAACTTGGAACTATTGATCCCTATTTCATCAAACTCGCCGATGCCATGGTCACTTGGGTTGAAGCTTGGGATGAGATTAATAACAACAAATCTGAAGAGACAACTTCAACCAAAGCTTCTGAGGTTGCTGCTACCAAGTGA 1095 0.4402 MASLPKPTPLLKDELDIVIPTIRNLDFLEMWRPFFEQYHLIIVQDGDPSKVIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGHEINALEQHIKNLLSPSTPFFFNTLYDPYREGTDFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPHERNTRFVDAVLTIPKGSLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVICDHLGYGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQAATLSKDCTSVQKCYIELSKQVKEKLGTIDPYFIKLADAMVTWVEAWDEINNNKSEETTSTKASEVAATK* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3004 364 SUPERFAMILY Nucleotide-diphospho-sugar transferases 38 247 IPR029044 -
Psa2g3004 364 PIRSF UPTG 5 349 IPR004901 GO:0016866|GO:0071669
Psa2g3004 364 PANTHER UDP-ARABINOSE MUTASE 3 356 IPR037595 -
Psa2g3004 364 Pfam Reversibly glycosylated polypeptide 11 345 IPR037595 -
Psa2g3004 364 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 3 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3004 Psa-Chr2 343235418 343238436 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3004 K13379 - gmx:100788017 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3004 2 343235418 343238436 Psa2g3004 2 343235418 343238436 ECH
Psa2g3004 2 343235418 343238436 Psa1g1508 1 102482731 102484975 ECH
Psa2g3004 2 343235418 343238436 Psa3g4653 3 432018345 432022004 ECH