Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2979 ATGTCTCCCGAGTTTCATCTTCTTCTTTTTCCTGACCTTGTTTACATTCACCCTCTCACTCTCAGTTTTCAAACTGCTATATGTTTTGGTTGGTTTGTTTTGTTTTTCCTGTTCTGGTTAACTCCGGGTGGGTTTGCTTGGGTTTTGTATAATAAGGCTTCGGGTTCGGTCCGGTCTGTTATTCCTGGTCCGTCTTTTTCCGGTTTGTTTGGGCTTTTGTCAGGAGAAACTCCTCACCGTGTTTTAGCCAAGGTCGCTCGGAGTCACCGAGCTGAGTCGTTGATGGCTTTTTCTGTTGGTCTGACTCGGTTTGTTATTTCGAGTGAACCGGAAACTGCGAAAGAGATTCTTTGCAGTTCTGCTTTTGGTGATAGGCCGGTTAAGGAATCGGCTTACGAGCTGTTGTTTCATAGGGCAATGGGTTTTGCACCGTACGGTGAGTACTGGAGGAATCTGAGAAGGATTTCTTCCACCCATTTGTTTTGTCCTAGAAGGATAAACGGGTTTGAAGGTTTTAGGAGTGATGTAGGATTAAAAATGGTGAAAAGAATAGAGTTTTTGATGGGTGAAATGGGTAGTGTTGAGGTGAAGAAAGTTCTTCATTTTGGGTCGCTTAACAACGTAATGATGACTGTGTTTGGGAAGTGTTATGAGTTTTTTGATGGAGATGGTTCTGAGCTTGAGGAAATGGTGAGTGAAGGTTACGAGTTGTTGGGTGTTTTTAACTGGAGTGATCATTATCCTGTTTTGGGTTGGTTGGATTTGCAGGGTGTTAGGAAAAGGTGTAGGGTTTTGGTAACTAAGGTTAATGCATATGTTGGAAAAATCATAGAGGAGCATAGAATGAGGAGAATGTCTGAAGGAAAATCTTTAGTGGGTGATTTTGTTGACGTTTTGCTTGATTTGGAAGAAAAAGACAAGCTCAGTGATTCAGATATGATTGCAGTACTTTGGGAGATGATTTTCAGAGGAACTGACACGGTTGCGATTTTGCTGGAATGGATTCTGGCTAGGATGGTCCTTCATCCAGAGATACAAGCAAAAGTACATGAAGAAATCGATCGTGTAGTTGGAAATTCCAAGGTTATTACTGATGTTGATGTTCAAGACATGCGTTATCTGCAGTGCATTGTGAAAGAAACTTTAAGGGTTCATCCACCAGGACCACTTTTATCATGGGCACGTTTATCAGTGCACGATGTTATGGTAGGTGACAAGTTCATTCCGAAAGGAACAACTGCCATGGTGAATATGTGGGCTATAACACATGATGAGAAAGTCTGGAATGATCCTGAGGTGTTTAGTCCCGAGAGGTTTATGGCTGAAGATGTTAGCGTTTTGGGTTCTGATTTGAGGTTGGCTCCGTTCGGAGCTGGGAGAAGAGTTTGTCCTGGAAAAGCCATGGGTTTAGCTTCTGTCCATCTATGGTTAGCTCAGTTGCTTCAGAGGTTTAAATGGGTTCCATCTGATGATTCTCCTGTTGATTTGGATGAATGTCTTAAGCTTTCCATGGAGATGAAATCACCACTTGTGTGCAAGGTTGTTCCTAGGATCTAA 1557 0.4245 MSPEFHLLLFPDLVYIHPLTLSFQTAICFGWFVLFFLFWLTPGGFAWVLYNKASGSVRSVIPGPSFSGLFGLLSGETPHRVLAKVARSHRAESLMAFSVGLTRFVISSEPETAKEILCSSAFGDRPVKESAYELLFHRAMGFAPYGEYWRNLRRISSTHLFCPRRINGFEGFRSDVGLKMVKRIEFLMGEMGSVEVKKVLHFGSLNNVMMTVFGKCYEFFDGDGSELEEMVSEGYELLGVFNWSDHYPVLGWLDLQGVRKRCRVLVTKVNAYVGKIIEEHRMRRMSEGKSLVGDFVDVLLDLEEKDKLSDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQAKVHEEIDRVVGNSKVITDVDVQDMRYLQCIVKETLRVHPPGPLLSWARLSVHDVMVGDKFIPKGTTAMVNMWAITHDEKVWNDPEVFSPERFMAEDVSVLGSDLRLAPFGAGRRVCPGKAMGLASVHLWLAQLLQRFKWVPSDDSPVDLDECLKLSMEMKSPLVCKVVPRI* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2979 518 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g2979 518 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g2979 518 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g2979 518 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g2979 518 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g2979 518 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g2979 518 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g2979 518 PANTHER CYTOCHROME P450 78A7-RELATED 1 517 - -
Psa2g2979 518 PANTHER CYTOCHROME P450 78A5 1 517 - -
Psa2g2979 518 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g2979 518 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g2979 518 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g2979 518 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g2979 518 SUPERFAMILY Cytochrome P450 61 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g2979 518 Gene3D Cytochrome P450 51 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g2979 518 Pfam Cytochrome P450 69 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa2g2979 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2979 Psa-Chr2 340915742 340918342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2979 1 517 Cytochrome P450 AT1G13710 62.644 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2979 K20619 - qsu:111986572 709.523