Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2886 ATGGACCGACTACCGTGGAAGGAGGAAGAAGAAGCGGCGGTTGGCGGTGGAGAAAGTGGACCGCCGCAAAGACCGAATTTAATCCTCCCGCCACGTACGGACGCCTTTTTCAGCGGCGGTTTTAGCCCCGGTCCTATGACTTTGCTCTCTAATTTATTGACTGACGGTGATGACGGCAAATCCTTCTCTCAGCTTCTCTCCGGTGCCATGGTGTCTCCGGTATCCGCCACCGCTGGCGCGCTTGATTCACCTGGCTTCTTTTCACATCCTCAGGTGTCCTTTGGATTGTCACACCAGCAGGCACAGGTCTCATTTCAAGGAGAACAATCCAACACAGATATGTATAACCAAGCTGAACATTCATTGTCTGTATCAGCATCCACCGCATTCACCACTCACGCTCCTCCTTCCGGACAAAGGTTGCAGTCTTCTTCGTTGAATGTTGATAAGCCTGCTGATGACGGTTACAATTGGAGGAAGTATGGACAGAAACAGGTGAAAGGTAGCGAGTTTCCTCGAAGTTATTACAAGTGCACACATCCTAACTGTCCTGTCAAGAAAAAGGTTGAGCGGTCGCTTGAAGGTCATGTAACCGCGATTATTTATAAAGGAGAGCACAATCATCAACGTCCCAATCCTACCAAGCGGCCGAAAGACACTAATGACAATTCAAATATGCAAGGGAATGCTGATTCGTCTTATCAACGAACGTTTACAAACTCAACGTCTATGACGGATCCCGAATCCAGTCACACAACAGGTCAACATCTATCTGGAACGAGCGATAGTGAGGAAGTAGGTGATCGTGAAACTGAAGTGGAAGAGAAAAGAGTTGAGCCTGATTCTAAAAGGAGAAATACAGAAGTTGCAGTCTCAGATCCAATAGTTTTGTCACATAGAACTGTCGTGGAGCCTAGAATCATCGTGCAAACGACTAGTGAAGTTGATCTCTTAGATGATGGTTATAGATGGCGAAAATATGGACAGAAAGTTGTTAAAGGCAACCCTTATCCTAGGAGCTATTACAAATGTACAACACCGGGTTGCAACGTTCGCAAGCATGTAGAGAGGGCTTCGACAGATCCTAAAGCAGTCATAACAACATACGAAGGAAAACATAATCATGATGTTCCAGCAGCTAAGACCAATAGCCATACTTTTGCCAACAAAAATGCTTCACAGTTAAAATCACAAAGTACCATTTCTGAGCAGCCTAGTTTCGCCAACATTGGTAGTGTCGGCGGCAATGAGCAACAACCTGTTGCGCGTCTAAGGCTGAAGGAAGAGCGGATAACTTAA 1299 0.4611 MDRLPWKEEEEAAVGGGESGPPQRPNLILPPRTDAFFSGGFSPGPMTLLSNLLTDGDDGKSFSQLLSGAMVSPVSATAGALDSPGFFSHPQVSFGLSHQQAQVSFQGEQSNTDMYNQAEHSLSVSASTAFTTHAPPSGQRLQSSSLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLEGHVTAIIYKGEHNHQRPNPTKRPKDTNDNSNMQGNADSSYQRTFTNSTSMTDPESSHTTGQHLSGTSDSEEVGDRETEVEEKRVEPDSKRRNTEVAVSDPIVLSHRTVVEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTFANKNASQLKSQSTISEQPSFANIGSVGGNEQQPVARLRLKEERIT* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2886 432 Gene3D WRKY domain 139 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa2g2886 432 Gene3D WRKY domain 303 379 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa2g2886 432 Pfam WRKY DNA -binding domain 153 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g2886 432 Pfam WRKY DNA -binding domain 319 376 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g2886 432 SUPERFAMILY WRKY DNA-binding domain 150 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa2g2886 432 ProSiteProfiles WRKY domain profile. 153 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g2886 432 MobiDBLite consensus disorder prediction 1 25 - -
Psa2g2886 432 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 78 132 - -
Psa2g2886 432 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 143 431 - -
Psa2g2886 432 MobiDBLite consensus disorder prediction 239 288 - -
Psa2g2886 432 SMART WRKY_cls 318 377 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g2886 432 SMART WRKY_cls 152 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g2886 432 MobiDBLite consensus disorder prediction 239 261 - -
Psa2g2886 432 MobiDBLite consensus disorder prediction 201 224 - -
Psa2g2886 432 MobiDBLite consensus disorder prediction 262 288 - -
Psa2g2886 432 ProSiteProfiles WRKY domain profile. 313 378 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa2g2886 432 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 78 132 IPR044810 GO:0003700
Psa2g2886 432 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 143 431 IPR044810 GO:0003700
Psa2g2886 432 MobiDBLite consensus disorder prediction 408 432 - -
Psa2g2886 432 SUPERFAMILY WRKY DNA-binding domain 310 378 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2886 Psa-Chr2 334744096 334746732 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2886 7 432 WRKY Transcription Factor Family AT2G03340 49.343 2.48e-143 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa2g2886 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2886 - - gmx:100127369 604.364