Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2880 ATGGAGAGCAAAGGATTAAGCCAATGGTTAAAGTTAAGCCTTTTTGTTGTGATTGTTTTGTTATTTATTAAGGCAGAAGCTGATTCTGCACCAATCACTTTTCTTCAGAATGCGGTTGCAAAAGGAGCAGTATGTTTGGATGGAAGTCCACCAGCTTATCATTTTGTAAAAGGATATGGCACAGGAATTAACAACTGGTTAGTTCATATAGAGGGAGGAGGATGGTGCAACGATGTCACTTCATGTCTTGATCGAAAAACTACTCGTTTAGGTTCATCTAAGGAAATGGCTACTAGTCTTCCATTTTCAGGAATCTTAAATGACAAGAAAGAGTTTAATCCCGATTTCTACAATTGGAACAGAATTAAGGTTAGATATTGTGATGGTTCATCTTTTACTGGCGATGTGGAAGAAGTTGATCAGAAAACTCAGTTGCACTTTAGAGGAGCAAGAATTTTCGACGCTGTCATGGAGGATTTGCTAGAGAAAGGAATGAAGAATGCTCGAAATGCAGTTTTCTCAGGATGTTCGGCCGGAGGATTAACTGTGTTACTGCATTGTGATAAATTTCGAGCTCTTTTACCAAAAGATGCTAAAGTGAAATGTCTTCCTGATGCTGGTTACTTTATAAACGCAAAAGATTTATCCGGAGAACCGCACGTCGAACAGTTCTTCAATCAAATTGTTACCACTCATGGTTCTGCAAAGAATTTGCCTAAATCATGCACTTCAAAACTCAAACCAGAGCTGTGTTTTTTCCCTCAATATTTTGCATCAGAGATCACTACACCAATCTTCGTTCTAAATTCACCTATCGACTCATGGCAGATTAAGAACATTTTCGTGACGGGTAATGTTGATCCTAAAAGATATTGGCGTAACTGCAGACAAGATTTAAACAAATGCACTCCGGATCAACTAGATCGCGTGGAAGGCTATAGGGCAGAATTCTTAAAGGCATTATCTGTTATAGGCAACTCTCCATCCAATGGAGAGTTTATAGATTCTTGTTATCTCCATTGCCAAACTGAATTGCAGGAATTATGGCAATGGAGTGATTCTCCATCCTTGGCCAATACAACCATTGCAAAGGCTGTAGCAGACTGGTTTCATGATAGAAAGCCTTTCCATCAGATAGATTGTCCTTACCCTTGCAATCCAACTTGTCACAACCGCACTTCTGAACCTCCTAAAAGCAGTCCAACATTATAG 1212 0.3936 MESKGLSQWLKLSLFVVIVLLFIKAEADSAPITFLQNAVAKGAVCLDGSPPAYHFVKGYGTGINNWLVHIEGGGWCNDVTSCLDRKTTRLGSSKEMATSLPFSGILNDKKEFNPDFYNWNRIKVRYCDGSSFTGDVEEVDQKTQLHFRGARIFDAVMEDLLEKGMKNARNAVFSGCSAGGLTVLLHCDKFRALLPKDAKVKCLPDAGYFINAKDLSGEPHVEQFFNQIVTTHGSAKNLPKSCTSKLKPELCFFPQYFASEITTPIFVLNSPIDSWQIKNIFVTGNVDPKRYWRNCRQDLNKCTPDQLDRVEGYRAEFLKALSVIGNSPSNGEFIDSCYLHCQTELQELWQWSDSPSLANTTIAKAVADWFHDRKPFHQIDCPYPCNPTCHNRTSEPPKSSPTL* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2880 403 PANTHER PECTIN ACETYLESTERASE 6 394 - -
Psa2g2880 403 PANTHER NOTUM-RELATED 6 394 IPR004963 GO:0016787
Psa2g2880 403 Pfam Pectinacetylesterase 24 375 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2880 Psa-Chr2 333942355 333945668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2880 6 401 Carbohydrate Esterase AT4G19420 55.220 4.47e-180 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2880 K19882 - gmx:100776478 607.831