Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2824 ATGAAGTTGGCTCTTGCATTAACCCTCTCAATGGTATTAGCACTTGCTGGTGTTTTATTTATAGCATTCGGTTGCAGAACGAAACAGAAAATGTGGGAAGTGAAACAAAGTTCATACAGAGAAGAACAGAATGTCTCCGGTCCATTTTCGTTCCAAACTGATTCAACAACGTGGGTTGCTGATGTCAAACAAGCAACATCAATTCCAGTAGTAATCTTTGAGAAGCCGTTGTTGAATATAACTTTTGCAGACCTCTTATCTGCAATTTCGAATTTCGATAGAGGTACCCTCTCGGCTGAAGGAAAGTTTGGACCTGTTTATAGAGGCTTTCTACCTGGAAATATCCATGTAGCAGTCAAAGGTTTGGCTGTTGGTTCTACATTAACAGATGAAGAAGCCGCAAGAAAGCTTGAGTTTCTCGGTAAAATCAAGCACCCTAATCTAGTTCCTTTAACCGGTTATTGTTTAGCCGGTGGTCAAAGGATTGCTATATATGATTACATGGAGAATGGAAACTTGCAAAATCTTCTCTATGATTTGCCGCTTGGGGTTCAAAGCACTGATGATTGGAACACCGACACACGGGAAGAAGCTGCTGACAGTAATGGAATTCAGAATGTTGGTTCTGAAGGATTACTCACAACTTGGAGATTTCGACACAAAATCGCGCTTGGAACTGCAAGGGCACTGGCATTTCTGCATTCACGCCACATTACATTCGCCGTGTTAAACACAATAATCTGCATCACACCTGCTTTTAAGGACAAGGCACGGAACCGTGTTGATGACCTGCAGCTGACATTCATGGATTTGCAGTTTGCTGGGAAGGAGAGTCGTACTATTGATGCTGCAGTTCTTGAGGAACAAGTGCATCAGATGCTTCGTGAGTGGAAGGCCGAGCTCAATGAGCCTTCTCCTGCTTCTTCTTTGCAGCAAGGTGGAAGTCTTGGGTCATTCTCCACCGATATCTGTCGGCTTTTGCAGCTCTGCGAGGAAGAAGATGATGCCTCCAGTCCATTGGCTGCACCTAAGCCTGAACCTAATAACCAGACTCTTCAGGCTGGGGATAAAGTCATTTTTCAAGCAGGCCAGCAGCAACATGATTTTCCGTTGGTTGATGAGCGCAAGCAGTCAACCTCAGGAGTTCAAACAGCAGACACAACACAACAGGAAGACCACCAATTTGGATGA 1191 0.4433 MKLALALTLSMVLALAGVLFIAFGCRTKQKMWEVKQSSYREEQNVSGPFSFQTDSTTWVADVKQATSIPVVIFEKPLLNITFADLLSAISNFDRGTLSAEGKFGPVYRGFLPGNIHVAVKGLAVGSTLTDEEAARKLEFLGKIKHPNLVPLTGYCLAGGQRIAIYDYMENGNLQNLLYDLPLGVQSTDDWNTDTREEAADSNGIQNVGSEGLLTTWRFRHKIALGTARALAFLHSRHITFAVLNTIICITPAFKDKARNRVDDLQLTFMDLQFAGKESRTIDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDASSPLAAPKPEPNNQTLQAGDKVIFQAGQQQHDFPLVDERKQSTSGVQTADTTQQEDHQFG* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2824 396 MobiDBLite consensus disorder prediction 343 360 - -
Psa2g2824 396 SUPERFAMILY Protein kinase-like (PK-like) 73 239 IPR011009 -
Psa2g2824 396 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 235 - -
Psa2g2824 396 SMART tyrkin_6 92 340 IPR020635 GO:0004713|GO:0006468
Psa2g2824 396 MobiDBLite consensus disorder prediction 335 396 - -
Psa2g2824 396 MobiDBLite consensus disorder prediction 376 396 - -
Psa2g2824 396 Pfam Protein tyrosine and serine/threonine kinase 99 238 IPR001245 GO:0004672|GO:0006468
Psa2g2824 396 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Psa2g2824 396 ProSiteProfiles Protein kinase domain profile. 92 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g2824 396 PANTHER CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED 1 235 - -
Psa2g2824 396 Gene3D Phosphorylase Kinase; domain 1 52 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2824 Psa-Chr2 327338898 327341052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2824 253 394 VOZ-9 Transcription Factor Family AT1G28520 63.333 1.96e-53 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Psa2g2824 PK_Tyr_Ser-Thr 1.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2824 - - gmx:100797738 414.461