Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2805 ATGGGTTTGTTGGGTTCTGAGAATGGTAAAGTTGCTGAGAATTGGGATGTGTTTAAATCAAAGGTGAGTAAGAAGAAGAAGAAGAAGAATAAAGAGAATGAGAGTGTGATTAAAGAGGAAAAAACTGGGTGTTGGGTTAGATTGAGATTTTTTAGTAGCTGCATTTCTTCAAGATCCAAAGTTGATACCTCAGTCAGTGGCACCGGTACCAGTACTCATTATGCTGAAAGTAAATCAACTAATGATACAAGTAGATGCCAACCAACAGTTCCGATAATCTCTTCGACAACGACTAGTAATGCAGAAAGCAATTCGTCCACTTCTAAACTTGAAGAGGAGCTTAAAATTGCTTCCAGGCTGCGGAAATTCTCTTTCAATGAACTTAAGTCGGCGACAAGAAATTTCCGGCCCGAGAGTTTTCTTGGCGAAGGTGGGTTCGGTTGTGTTTTCAAGGGTTGGATCGAAGAAAACGGAACTGCTGCAGTGAAGCCTGGTACAGGGCTTACCGTCGCTGTGAAAACCCTTAACCACGATGGGCTTCAGGGTCATAAAGAATGGCTGGCCGAGGTAAATTTTCTTGGCGATTTAGTTCATCAGAACCTTGTTAAACTCGTTGGTTACTGTATCGAAGATAATCAAAGGTTGTTAGTGTATGAATTCATGCCTCGGGGAAGCCTCGAAAATCACTTATTTAGGAGATCTCTGCCTCTTCCATGGTCGATTAGGATGAAAATTGCGCTAGGAGCTGCGCAGGGTCTTGCTTTTCTTCACGAAGAAGCTGAACGGCCAGTAATATATAGGGATTTTAAAACTTCGAATATACTATTAGATGCGGACTACAATGCGAAGCTCTCGGACTTTGGTCTTGCCAAAGATGGTCCAGAAGGTGATAAAACCCATGTGTCTACTCGAGTAATGGGAACCTATGGTTACGCAGCACCAGAATATGTCATGACAGGTCATCTTACATCAAAAAGTGACGTGTACAGTTTCGGAGTCGTCCTACTTGAGATGTTAACCGGCAGAAGATCTATGGACAAACACCGACCCAACGGTGAACACAACCTTGTCGAGTGGGCTCGACCGCATCTAGGAGAACGAAGAAGGTTCTACCGGTTAATAGACCCTCGTCTCGAAGGTCACTTTTCTGTAAAAGGAGCTCAGAAAGCTGCGCAACTAGCCGCCCACTGTCTAAGCAGAGATCCAAAAGCGAGACCCCTAATGAGTGAAGTCGTGGAAGCTTTAAAGCCTCTTCCAAACCTTAAAGACATGGCAAGCTCGTCATACTATTTCCAAACAATGCAAGCCGATCGGTTTGGAGCGAGTCCAAACACTAGAAGCGCGCATGTACAAGGAGCATCGCTCGCTCGGAATGGACAACAAAGAAGGAGCCTTTCGATACCGAATGGTACTCATGTATCTCCCTATCACCACAAGTTTCCCCAACAATCACCTAAACCTAATGGCAAATCATAG 1476 0.4438 MGLLGSENGKVAENWDVFKSKVSKKKKKKNKENESVIKEEKTGCWVRLRFFSSCISSRSKVDTSVSGTGTSTHYAESKSTNDTSRCQPTVPIISSTTTSNAESNSSTSKLEEELKIASRLRKFSFNELKSATRNFRPESFLGEGGFGCVFKGWIEENGTAAVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHQNLVKLVGYCIEDNQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAQGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSVKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFGASPNTRSAHVQGASLARNGQQRRSLSIPNGTHVSPYHHKFPQQSPKPNGKS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2805 491 PANTHER OS01G0588500 PROTEIN-RELATED 66 481 - -
Psa2g2805 491 MobiDBLite consensus disorder prediction 443 462 - -
Psa2g2805 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Psa2g2805 491 SUPERFAMILY Protein kinase-like (PK-like) 113 415 IPR011009 -
Psa2g2805 491 Gene3D Transferase(Phosphotransferase) domain 1 221 436 - -
Psa2g2805 491 MobiDBLite consensus disorder prediction 65 107 - -
Psa2g2805 491 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 66 481 - -
Psa2g2805 491 ProSiteProfiles Protein kinase domain profile. 135 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g2805 491 Pfam Protein tyrosine and serine/threonine kinase 140 415 IPR001245 GO:0004672|GO:0006468
Psa2g2805 491 ProSitePatterns Protein kinases ATP-binding region signature. 141 173 IPR017441 GO:0005524
Psa2g2805 491 CDD STKc_IRAK 141 418 - -
Psa2g2805 491 MobiDBLite consensus disorder prediction 468 491 - -
Psa2g2805 491 Gene3D Phosphorylase Kinase; domain 1 109 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2805 Psa-Chr2 325667886 325672074 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2805 82 415 Glycoside Hydrolase AT3G07070 54.006 1.82e-118 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Psa2g2805 PK_Tyr_Ser-Thr 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2805 - - gmx:100787151 844.343